Paraburkholderia caledonica strain Bk sc_041

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Paraburkholderia

Description

Paraburkholderia caledonica strain Bk sc_041 is characterized as a rod-shaped bacterium possessing flagella, which suggests it is capable of motility. The presence of flagella typically indicates that the organism can navigate its environment, potentially enhancing its ability to colonize various niches and interact with other microorganisms. This strain has a single replicon, indicating a streamlined genetic organization that can be an advantage in specific ecological contexts, such as rapid adaptation to environmental changes. The genomic data for Paraburkholderia caledonica strain Bk sc_041 is cataloged under the accession NHOM00000000.1, providing a reference point for researchers interested in the genetic and functional characteristics of this organism. In ecological terms, members of the Paraburkholderia genus are often associated with diverse environments, including soil and plant rhizospheres, where they can play significant roles in nutrient cycling and plant health. The motility conferred by its flagella may facilitate interactions with plant roots or other microorganisms, potentially enhancing its ecological role. Understanding the specific traits of Paraburkholderia caledonica strain Bk sc_041 can provide insights into its potential applications in bioremediation or agriculture, as well as its contributions to microbial communities in its native habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusParaburkholderia
SpeciesParaburkholderia caledonica
Strainstrain Bk sc_041

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paraburkholderia caledonica strain Bk sc_041, whole genome shotgun

Gene Summary

Adenine Count

1394987 bp

Thymine Count

1401119 bp

Guanine Count

2273005 bp

Cytosine Count

2267833 bp

Genome Length

7337283 bp

Protein-coding Genes

6410 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phenylacetate-coa ligaseBWU74_28725Not AvailableNegative6428907 - 643021147734.4
phenylacetic acid degradation protein paadBWU74_28730Not AvailableNegative6430413 - 643090117196.4
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomeraseBWU74_28735Not AvailableNegative6430903 - 643169427804.3
3-oxoadipyl-coa thiolaseBWU74_28740Not AvailableNegative6431748 - 643295042073.6
phenylacetic acid degradation protein paanBWU74_28745Not AvailableNegative6433072 - 643477260223.3
enoyl-coa hydrataseBWU74_28750Not AvailablePositive6434904 - 643568027898.0
hypothetical proteinBWU74_28760Not AvailableNegative6436316 - 643663611694.9
hypothetical proteinBWU74_28765Not AvailableNegative6436795 - 643749925941.8
arac family transcriptional regulatorBWU74_28770Not AvailableNegative6437587 - 643837828715.4
hypothetical proteinBWU74_28775Not AvailablePositive6438474 - 643875810239.2

Displaying genes 5681 – 5690 of 6470 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.