Yersinia frederiksenii strain CFSAN060535

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Yersinia

Description

Yersinia frederiksenii strain CFSAN060535 is a Gram-negative bacterium characterized by its rod shape and the presence of flagella, which suggests motility. This strain has been isolated from environmental sources and food, indicating its potential presence in diverse ecological niches. Yersinia frederiksenii is known to have a single replicon, which is a feature that contributes to its genomic stability and replication efficiency. This strain has been documented to infect hosts such as Homo sapiens and various Metazoa, highlighting its relevance in both human health and broader ecological interactions. The accession number for this strain is NHOJ00000000.1, which aids in the identification and classification of Yersinia frederiksenii within microbial databases. The presence of this bacterium in food and environmental settings raises important considerations regarding food safety and public health, as it could potentially be associated with foodborne illnesses. Ecologically, the adaptability of Yersinia frederiksenii to inhabit both environmental and food sources may reflect its role in nutrient cycling and interactions within microbial communities. Understanding the distribution and characteristics of this strain can provide insights into its behavior in various ecosystems and its implications for human health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusYersinia
SpeciesYersinia frederiksenii
Strainstrain CFSAN060535

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Yersinia frederiksenii strain CFSAN060535
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatenvironment; food
Biotic relationshipNot Available
Host(s)Homo sapiens, Metazoa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Yersinia frederiksenii strain CFSAN060535 CFSAN060535_contig_66,

Gene Summary

Adenine Count

1282314 bp

Thymine Count

1284764 bp

Guanine Count

1127070 bp

Cytosine Count

1121794 bp

Genome Length

4815983 bp

Protein-coding Genes

4191 genes

Non-Coding Genes

260 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-metNot AvailableNot AvailablePositive172525 - 172601Not Available
rna polymerase sigma factor rpodCBW53_00870Not AvailableNegative172807 - 17463969902.9
dna primaseCBW53_00875Not AvailableNegative174799 - 17654765889.0
30s ribosomal protein s21CBW53_00880Not AvailableNegative176684 - 1768998500.42
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsadCBW53_00885Not AvailablePositive177273 - 17828635927.3
hypothetical proteinCBW53_00890Not AvailablePositive178326 - 17913831186.4
selenoprotein ydfzCBW53_00895Not AvailablePositive179477 - 1796897802.53
appa family phytase/histidine-type acid phosphataseCBW53_00900Not AvailableNegative179927 - 18125248316.3
glucose-1-phosphate adenylyltransferaseCBW53_00905Not AvailablePositive181576 - 18285347524.8
hypothetical proteinCBW53_00910Not AvailableNegative183086 - 18345713954.4

Displaying genes 411 – 420 of 4451 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.