Pseudoalteromonas sp. GCY

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Pseudoalteromonadaceae

Genus

Pseudoalteromonas

Description

Pseudoalteromonas sp. GCY is a rod-shaped bacterium characterized by a single replicon, indicating a simplified genomic architecture. This organism is a member of the Pseudoalteromonas genus, which is known for its diverse metabolic capabilities and ecological roles in marine environments. The strain is cataloged under the accession number NHNM00000000.1, which serves as a reference for its genetic information. The Pseudoalteromonas genus has been associated with various ecological functions, including the production of bioactive compounds, which could have implications for biotechnological applications and marine ecology. The rod shape of Pseudoalteromonas sp. GCY may influence its motility and interaction with the surrounding environment, potentially enhancing its ability to colonize surfaces or form biofilms. Such traits can play a significant role in nutrient cycling and interactions with other microorganisms in marine ecosystems. In summary, Pseudoalteromonas sp. GCY, with its rod shape and single replicon, exemplifies the ecological diversity within the Pseudoalteromonas genus, highlighting its potential contributions to marine microbial communities and its relevance in biotechnological explorations.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPseudoalteromonadaceae
GenusPseudoalteromonas
SpeciesPseudoalteromonas sp. GCY
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoalteromonas sp. GCY Scaffold74_1, whole genome shotgun

Gene Summary

Adenine Count

1523406 bp

Thymine Count

1530448 bp

Guanine Count

1173840 bp

Cytosine Count

1157245 bp

Genome Length

5384939 bp

Protein-coding Genes

4433 genes

Non-Coding Genes

250 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylaseCBQ28_16245Not AvailableNegative3671580 - 367233528109.8
ggdef domain-containing proteinCBQ28_16250Not AvailableNegative3672454 - 367345537847.7
duf885 domain-containing proteinCBQ28_16255Not AvailablePositive3673841 - 367562267772.7
s-methyl-5-thioribose kinaseCBQ28_16260Not AvailableNegative3675698 - 367690044978.6
s-methyl-5-thioribose-1-phosphate isomeraseCBQ28_16265Not AvailablePositive3677021 - 367804336565.7
peptidase s9CBQ28_16270Not AvailablePositive3678137 - 368008072934.0
hypothetical proteinCBQ28_16275Not AvailablePositive3680414 - 368080914664.7
acireductone dioxygenaseCBQ28_16280Not AvailableNegative3680833 - 368137520458.8
acireductone synthaseCBQ28_16285Not AvailableNegative3681372 - 368205825373.9
methylthioribulose-1-phosphate dehydrataseCBQ28_16290Not AvailableNegative3682055 - 368266922291.6

Displaying genes 3301 – 3310 of 4683 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.