Pseudoalteromonas sp. GCY

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Pseudoalteromonadaceae

Genus

Pseudoalteromonas

Description

Pseudoalteromonas sp. GCY is a rod-shaped bacterium characterized by a single replicon, indicating a simplified genomic architecture. This organism is a member of the Pseudoalteromonas genus, which is known for its diverse metabolic capabilities and ecological roles in marine environments. The strain is cataloged under the accession number NHNM00000000.1, which serves as a reference for its genetic information. The Pseudoalteromonas genus has been associated with various ecological functions, including the production of bioactive compounds, which could have implications for biotechnological applications and marine ecology. The rod shape of Pseudoalteromonas sp. GCY may influence its motility and interaction with the surrounding environment, potentially enhancing its ability to colonize surfaces or form biofilms. Such traits can play a significant role in nutrient cycling and interactions with other microorganisms in marine ecosystems. In summary, Pseudoalteromonas sp. GCY, with its rod shape and single replicon, exemplifies the ecological diversity within the Pseudoalteromonas genus, highlighting its potential contributions to marine microbial communities and its relevance in biotechnological explorations.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPseudoalteromonadaceae
GenusPseudoalteromonas
SpeciesPseudoalteromonas sp. GCY
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoalteromonas sp. GCY Scaffold74_1, whole genome shotgun

Gene Summary

Adenine Count

1523406 bp

Thymine Count

1530448 bp

Guanine Count

1173840 bp

Cytosine Count

1157245 bp

Genome Length

5384939 bp

Protein-coding Genes

4433 genes

Non-Coding Genes

250 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hlyd family secretion proteinCBQ28_15400Not AvailableNegative3433270 - 343422034963.6
macrolide abc transporter atp-binding proteinCBQ28_15405Not AvailableNegative3434202 - 343488825198.3
activity regulator of membrane protease ybbkCBQ28_15410Not AvailableNegative3435115 - 343556716727.6
isas1 family transposaseCBQ28_15425Not AvailableNegative3438321 - 343941841426.9
is5/is1182 family transposaseCBQ28_15430Not AvailablePositive3439755 - 344045126327.0
hypothetical proteinCBQ28_15435Not AvailableNegative3440948 - 344225848772.3
hypothetical proteinCBQ28_15445Not AvailableNegative3443846 - 344628491468.7
abc transporter atp-binding proteinCBQ28_15450Not AvailableNegative3446284 - 344700926148.9
rnd transporterCBQ28_15455Not AvailableNegative3447026 - 344827346829.9
isas1 family transposaseCBQ28_15460Not AvailablePositive3448632 - 344973241588.3

Displaying genes 3141 – 3150 of 4683 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.