Pseudoalteromonas sp. GCY

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Pseudoalteromonadaceae

Genus

Pseudoalteromonas

Description

Pseudoalteromonas sp. GCY is a rod-shaped bacterium characterized by a single replicon, indicating a simplified genomic architecture. This organism is a member of the Pseudoalteromonas genus, which is known for its diverse metabolic capabilities and ecological roles in marine environments. The strain is cataloged under the accession number NHNM00000000.1, which serves as a reference for its genetic information. The Pseudoalteromonas genus has been associated with various ecological functions, including the production of bioactive compounds, which could have implications for biotechnological applications and marine ecology. The rod shape of Pseudoalteromonas sp. GCY may influence its motility and interaction with the surrounding environment, potentially enhancing its ability to colonize surfaces or form biofilms. Such traits can play a significant role in nutrient cycling and interactions with other microorganisms in marine ecosystems. In summary, Pseudoalteromonas sp. GCY, with its rod shape and single replicon, exemplifies the ecological diversity within the Pseudoalteromonas genus, highlighting its potential contributions to marine microbial communities and its relevance in biotechnological explorations.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPseudoalteromonadaceae
GenusPseudoalteromonas
SpeciesPseudoalteromonas sp. GCY
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoalteromonas sp. GCY Scaffold74_1, whole genome shotgun

Gene Summary

Adenine Count

1523406 bp

Thymine Count

1530448 bp

Guanine Count

1173840 bp

Cytosine Count

1157245 bp

Genome Length

5384939 bp

Protein-coding Genes

4433 genes

Non-Coding Genes

250 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein-l-isoaspartate o-methyltransferaseCBQ28_14005Not AvailablePositive3095174 - 309581223144.2
peptidoglycan-binding proteinCBQ28_14010Not AvailablePositive3095937 - 309675830327.7
rna polymerase sigma factor rposCBQ28_14015Not AvailablePositive3096822 - 309780237326.5
valine--trna ligaseCBQ28_14020Not AvailableNegative3097888 - 3100737108379.0
dna polymerase iii subunit chiCBQ28_14025Not AvailableNegative3100758 - 310120416509.7
leucyl aminopeptidaseCBQ28_14030Not AvailableNegative3101595 - 310310654924.8
lps export abc transporter permease lptfCBQ28_14035Not AvailablePositive3103303 - 310441541356.0
lps export abc transporter permease lptgCBQ28_14040Not AvailablePositive3104412 - 310547939099.3
rdd family proteinCBQ28_14045Not AvailableNegative3105578 - 310607518351.9
Trna-leuNot AvailableNot AvailablePositive3106393 - 3106477Not Available

Displaying genes 2891 – 2900 of 4683 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.