Deinococcus indicus strain DR1

rodaerobic

Kingdom

Thermotogati

Phylum

Deinococcota

Class

Deinococci

Order

Deinococcales

Family

Deinococcaceae

Genus

Deinococcus

Description

Deinococcus indicus strain DR1 is a Gram-negative, aerobic, non-motile rod bacterium primarily found in aquifer habitats. This strain is characterized by its single replicon and is classified as mesophilic, with an optimal growth temperature of 29°C. Unlike some bacteria, D. indicus strain DR1 does not form spores, which may influence its survival strategies in its natural environment. The presence of true flagella in this strain suggests potential for motility in certain contexts, although it is noted to be non-motile in its current characterization. This unique combination of traits positions Deinococcus indicus strain DR1 as an organism well-adapted to its groundwater habitat, where it likely engages in metabolic processes that are reliant on aerobic conditions. The study of D. indicus strain DR1 enhances our understanding of microbial diversity in aquifers and the ecological roles these bacteria may play. Given their specific habitat and physiological characteristics, such bacteria could contribute to biogeochemical cycles within their environments, influencing nutrient availability and ecosystem dynamics. Their adaptation to mesophilic temperatures and aerobic conditions also underscores the importance of temperature and oxygen levels in shaping microbial communities in groundwater systems.

Taxonomy

KingdomThermotogati
PhylumDeinococcota
ClassDeinococci
OrderDeinococcales
FamilyDeinococcaceae
GenusDeinococcus
SpeciesDeinococcus indicus
Strainstrain DR1

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Image of Deinococcus indicus strain DR1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
Habitataquifers
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Deinococcus indicus strain DR1 Masurca_193_len:24273, whole genome

Gene Summary

Adenine Count

675731 bp

Thymine Count

672549 bp

Guanine Count

1556119 bp

Cytosine Count

1562983 bp

Genome Length

4467628 bp

Protein-coding Genes

4101 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carboxypeptidaseCBQ26_15985Not AvailablePositive3365943 - 336795270969.3
ornithine carbamoyltransferaseCBQ26_15990Not AvailablePositive3368094 - 336917339035.0
hypothetical proteinCBQ26_15995Not AvailablePositive3369244 - 336976218708.3
nudix hydrolaseCBQ26_16000Not AvailablePositive3369711 - 337027121305.3
hypothetical proteinCBQ26_16005Not AvailablePositive3370264 - 337059012237.6
n-acetyl-gamma-glutamyl-phosphate reductaseCBQ26_16010Not AvailablePositive3370587 - 337151032526.7
shikimate 5-dehydrogenaseCBQ26_16015Not AvailablePositive3371563 - 337234827703.2
hypothetical proteinCBQ26_16020Not AvailablePositive3372481 - 337308020677.5
segregation/condensation protein aCBQ26_16025Not AvailableNegative3373254 - 337401227002.2
tryptophan--trna ligaseCBQ26_16030Not AvailableNegative3374051 - 337504936637.1

Displaying genes 3161 – 3170 of 4159 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.