Deinococcus indicus strain DR1

rodaerobic

Kingdom

Thermotogati

Phylum

Deinococcota

Class

Deinococci

Order

Deinococcales

Family

Deinococcaceae

Genus

Deinococcus

Description

Deinococcus indicus strain DR1 is a Gram-negative, aerobic, non-motile rod bacterium primarily found in aquifer habitats. This strain is characterized by its single replicon and is classified as mesophilic, with an optimal growth temperature of 29°C. Unlike some bacteria, D. indicus strain DR1 does not form spores, which may influence its survival strategies in its natural environment. The presence of true flagella in this strain suggests potential for motility in certain contexts, although it is noted to be non-motile in its current characterization. This unique combination of traits positions Deinococcus indicus strain DR1 as an organism well-adapted to its groundwater habitat, where it likely engages in metabolic processes that are reliant on aerobic conditions. The study of D. indicus strain DR1 enhances our understanding of microbial diversity in aquifers and the ecological roles these bacteria may play. Given their specific habitat and physiological characteristics, such bacteria could contribute to biogeochemical cycles within their environments, influencing nutrient availability and ecosystem dynamics. Their adaptation to mesophilic temperatures and aerobic conditions also underscores the importance of temperature and oxygen levels in shaping microbial communities in groundwater systems.

Taxonomy

KingdomThermotogati
PhylumDeinococcota
ClassDeinococci
OrderDeinococcales
FamilyDeinococcaceae
GenusDeinococcus
SpeciesDeinococcus indicus
Strainstrain DR1

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Image of Deinococcus indicus strain DR1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
Habitataquifers
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Deinococcus indicus strain DR1 Masurca_193_len:24273, whole genome

Gene Summary

Adenine Count

675731 bp

Thymine Count

672549 bp

Guanine Count

1556119 bp

Cytosine Count

1562983 bp

Genome Length

4467628 bp

Protein-coding Genes

4101 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nitrite reductase small subunitCBQ26_07255Not AvailablePositive1504313 - 150464511621.9
uroporphyrinogen iii synthaseCBQ26_07260Not AvailablePositive1504624 - 150545730018.6
hypothetical proteinCBQ26_07265Not AvailableNegative1505556 - 150595414621.7
fe3+-citrate abc transporter substrate-binding proteinCBQ26_07270Not AvailablePositive1506115 - 150706234205.1
iron-dicitrate transporter atp-binding subunitCBQ26_07275Not AvailableNegative1507292 - 150809829187.4
iron abc transporter permeaseCBQ26_07280Not AvailableNegative1508095 - 150905131861.2
abc transporter substrate-binding proteinCBQ26_07285Not AvailableNegative1509108 - 151005233395.2
iron abc transporter permeaseCBQ26_07290Not AvailableNegative1510124 - 151111032993.4
sucrase ferredoxinCBQ26_07295Not AvailableNegative1511107 - 151208434306.4
abc transporter substrate-binding proteinCBQ26_07300Not AvailableNegative1512086 - 151304234015.9

Displaying genes 1441 – 1450 of 4159 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.