Deinococcus indicus strain DR1

rodaerobic

Kingdom

Thermotogati

Phylum

Deinococcota

Class

Deinococci

Order

Deinococcales

Family

Deinococcaceae

Genus

Deinococcus

Description

Deinococcus indicus strain DR1 is a Gram-negative, aerobic, non-motile rod bacterium primarily found in aquifer habitats. This strain is characterized by its single replicon and is classified as mesophilic, with an optimal growth temperature of 29°C. Unlike some bacteria, D. indicus strain DR1 does not form spores, which may influence its survival strategies in its natural environment. The presence of true flagella in this strain suggests potential for motility in certain contexts, although it is noted to be non-motile in its current characterization. This unique combination of traits positions Deinococcus indicus strain DR1 as an organism well-adapted to its groundwater habitat, where it likely engages in metabolic processes that are reliant on aerobic conditions. The study of D. indicus strain DR1 enhances our understanding of microbial diversity in aquifers and the ecological roles these bacteria may play. Given their specific habitat and physiological characteristics, such bacteria could contribute to biogeochemical cycles within their environments, influencing nutrient availability and ecosystem dynamics. Their adaptation to mesophilic temperatures and aerobic conditions also underscores the importance of temperature and oxygen levels in shaping microbial communities in groundwater systems.

Taxonomy

KingdomThermotogati
PhylumDeinococcota
ClassDeinococci
OrderDeinococcales
FamilyDeinococcaceae
GenusDeinococcus
SpeciesDeinococcus indicus
Strainstrain DR1

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Image of Deinococcus indicus strain DR1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
Habitataquifers
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Deinococcus indicus strain DR1 Masurca_193_len:24273, whole genome

Gene Summary

Adenine Count

675731 bp

Thymine Count

672549 bp

Guanine Count

1556119 bp

Cytosine Count

1562983 bp

Genome Length

4467628 bp

Protein-coding Genes

4101 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rnhcp domain-containing proteinCBQ26_05625Not AvailablePositive1148980 - 114932112497.7
two-component system response regulatorCBQ26_05630Not AvailableNegative1149328 - 114978616959.8
damage-inducible protein dinbCBQ26_05635Not AvailablePositive1150000 - 115044315561.3
inositol monophosphataseCBQ26_05640Not AvailablePositive1150440 - 115101219393.5
mbl fold metallo-hydrolaseCBQ26_05645Not AvailablePositive1151061 - 115190631410.3
n-acetyl-gamma-glutamyl-phosphate reductaseCBQ26_05650Not AvailableNegative1152140 - 115318938040.5
protein translocase subunit secdfCBQ26_05655Not AvailableNegative1153467 - 115576182228.2
hypothetical proteinCBQ26_05660Not AvailableNegative1155894 - 115623811925.5
hypothetical proteinCBQ26_05665Not AvailablePositive1156496 - 115702617860.7
translation initiation factor if-2CBQ26_05670Not AvailableNegative1157143 - 115893063544.9

Displaying genes 1121 – 1130 of 4159 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.