Pelagibacteraceae bacterium TMED195 143009

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Candidatus Pelagibacterales

Family

Candidatus Pelagibacteraceae

Genus

Description

Pelagibacteraceae bacterium TMED195 143009 is a member of the family Pelagibacteraceae, known for its role in marine ecosystems. This bacterium is notable for having a single replicon, which is characteristic of many marine bacteria that have streamlined genomes adapted for efficient nutrient utilization in oligotrophic environments. The genome of Pelagibacteraceae bacterium TMED195 is accessible through the accession NHIS00000000.2, providing a resource for further genomic studies and insights into its metabolic capabilities. The streamlined nature of its genome is indicative of a highly efficient metabolic pathway that enables it to thrive in nutrient-poor conditions, which is a common trait among members of the Pelagibacteraceae family. In ecological terms, Pelagibacteraceae bacterium TMED195 143009 contributes to the microbial loop in marine environments, playing a crucial role in the degradation of organic matter and the recycling of nutrients. This bacterium's efficiency in utilizing available resources can influence the productivity and nutrient dynamics of marine ecosystems. Understanding its genomic traits and ecological functions can provide valuable insights into the biodiversity and functioning of microbial communities in ocean environments.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Pelagibacteraceae bacterium TMED195 143009, whole genome

Gene Summary

Adenine Count

457262 bp

Thymine Count

464582 bp

Guanine Count

187667 bp

Cytosine Count

197631 bp

Genome Length

1307145 bp

Protein-coding Genes

1398 genes

Non-Coding Genes

27 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
molecular chaperone dnakCBD55_004835Not AvailableNegative892040 - 89401671307.1
alpha-ketoglutarate-dependent dioxygenase alkbCBD55_004840Not AvailablePositive894148 - 89475923389.3
nucleotide exchange factor grpeCBD55_004845Not AvailableNegative894766 - 89535022156.6
heat-inducible transcriptional repressor hrcaCBD55_004850Not AvailableNegative895365 - 89646540614.8
ribonuclease phCBD55_004855Not AvailablePositive896512 - 89723126364.0
non-canonical purine ntp pyrophosphataseCBD55_004860Not AvailablePositive897180 - 89782724288.4
hypothetical proteinCBD55_004865Not AvailableNegative897802 - 89991381243.6
outer membrane lipoprotein carrier protein lolaCBD55_004870Not AvailablePositive899852 - 90047524424.9
winged helix family transcriptional regulatorCBD55_004875Not AvailableNegative900472 - 90117627859.5
transpeptidaseCBD55_004880Not AvailablePositive901134 - 90164319869.7

Displaying genes 961 – 970 of 1425 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.