Pelagibacteraceae bacterium TMED195 143009

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Candidatus Pelagibacterales

Family

Candidatus Pelagibacteraceae

Genus

Description

Pelagibacteraceae bacterium TMED195 143009 is a member of the family Pelagibacteraceae, known for its role in marine ecosystems. This bacterium is notable for having a single replicon, which is characteristic of many marine bacteria that have streamlined genomes adapted for efficient nutrient utilization in oligotrophic environments. The genome of Pelagibacteraceae bacterium TMED195 is accessible through the accession NHIS00000000.2, providing a resource for further genomic studies and insights into its metabolic capabilities. The streamlined nature of its genome is indicative of a highly efficient metabolic pathway that enables it to thrive in nutrient-poor conditions, which is a common trait among members of the Pelagibacteraceae family. In ecological terms, Pelagibacteraceae bacterium TMED195 143009 contributes to the microbial loop in marine environments, playing a crucial role in the degradation of organic matter and the recycling of nutrients. This bacterium's efficiency in utilizing available resources can influence the productivity and nutrient dynamics of marine ecosystems. Understanding its genomic traits and ecological functions can provide valuable insights into the biodiversity and functioning of microbial communities in ocean environments.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Pelagibacteraceae bacterium TMED195 143009, whole genome

Gene Summary

Adenine Count

457262 bp

Thymine Count

464582 bp

Guanine Count

187667 bp

Cytosine Count

197631 bp

Genome Length

1307145 bp

Protein-coding Genes

1398 genes

Non-Coding Genes

27 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-isopropylmalate dehydratase large subunitCBD55_001260Not AvailableNegative234057 - 23545151073.5
50s ribosomal protein l19CBD55_001265Not AvailableNegative235468 - 23604621872.0
trna (guanosine(37)-n1)-methyltransferase trmdCBD55_001270Not AvailableNegative236043 - 23675026806.0
16s rrna processing protein rimmCBD55_001275Not AvailableNegative236740 - 23745627991.2
30s ribosomal protein s16CBD55_001280Not AvailableNegative237260 - 23797625625.2
signal recognition particle proteinCBD55_001285Not AvailableNegative237999 - 23937550751.2
diaminopimelate epimeraseCBD55_001290Not AvailablePositive239481 - 24031430914.5
trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtabCBD55_001295Not AvailablePositive240307 - 24155147403.6
signal recognition particle-docking protein ftsyCBD55_001300Not AvailablePositive241533 - 24246534073.7
maoc family dehydrataseCBD55_001305Not AvailablePositive242533 - 24300017681.6

Displaying genes 251 – 260 of 1425 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.