Flavobacteriaceae bacterium TMED42 58545

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Description

Flavobacteriaceae bacterium TMED42 58545 is a member of the family Flavobacteriaceae, characterized by a single replicon. This bacterium is cataloged under the accession number NHCV00000000.2, which provides a unique identifier for its genomic data in biological databases. The single replicon indicates a simplified genetic structure, potentially influencing its replication and metabolic processes. Members of the Flavobacteriaceae family are often associated with aquatic environments and can play significant roles in the decomposition of organic matter, contributing to nutrient cycling within their ecosystems. The ecological significance of Flavobacteriaceae bacterium TMED42 58545 may be tied to its ability to thrive in specific habitats, possibly utilizing diverse organic substrates. This ability could indicate its potential role in the breakdown of complex organic compounds, thus aiding in the degradation processes that are crucial for ecosystem health. Understanding the traits of Flavobacteriaceae bacterium TMED42 58545 enhances our knowledge of microbial diversity and function in various environments. Its genomic information could provide insights into the ecological roles of similar bacteria within the Flavobacteriaceae family, especially in aquatic ecosystems where they may contribute to biogeochemical cycles. Further studies on this bacterium could illuminate its specific functions and interactions within its habitat, highlighting the importance of such microbes in maintaining ecological balance.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Flavobacteriaceae bacterium TMED42 58545, whole genome

Gene Summary

Adenine Count

758899 bp

Thymine Count

754556 bp

Guanine Count

486343 bp

Cytosine Count

487794 bp

Genome Length

2493049 bp

Protein-coding Genes

2280 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
excinuclease abc subunit aCBC02_000400Not AvailableNegative91932 - 94715104301.0
sigma-70 family rna polymerase sigma factorCBC02_000405Not AvailablePositive94918 - 9551123198.8
endonuclease iiiCBC02_000410Not AvailableNegative95694 - 9634424599.2
thioredoxin-dependent thiol peroxidaseCBC02_000415Not AvailablePositive96384 - 9684216946.2
tonb-dependent receptorCBC02_000420Not AvailableNegative96839 - 9828755805.4
mbl fold metallo-hydrolaseCBC02_000425Not AvailablePositive98363 - 9913029132.1
hydrolaseCBC02_000430Not AvailablePositive99136 - 9963019612.4
phospholipaseCBC02_000435Not AvailableNegative99617 - 10025824178.8
dihydroorotaseCBC02_000440Not AvailableNegative100264 - 10152045628.1
tigr02757 family proteinCBC02_000445Not AvailableNegative101591 - 10234929391.3

Displaying genes 81 – 90 of 538 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.