Flavobacteriaceae bacterium TMED42 58545

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Description

Flavobacteriaceae bacterium TMED42 58545 is a member of the family Flavobacteriaceae, characterized by a single replicon. This bacterium is cataloged under the accession number NHCV00000000.2, which provides a unique identifier for its genomic data in biological databases. The single replicon indicates a simplified genetic structure, potentially influencing its replication and metabolic processes. Members of the Flavobacteriaceae family are often associated with aquatic environments and can play significant roles in the decomposition of organic matter, contributing to nutrient cycling within their ecosystems. The ecological significance of Flavobacteriaceae bacterium TMED42 58545 may be tied to its ability to thrive in specific habitats, possibly utilizing diverse organic substrates. This ability could indicate its potential role in the breakdown of complex organic compounds, thus aiding in the degradation processes that are crucial for ecosystem health. Understanding the traits of Flavobacteriaceae bacterium TMED42 58545 enhances our knowledge of microbial diversity and function in various environments. Its genomic information could provide insights into the ecological roles of similar bacteria within the Flavobacteriaceae family, especially in aquatic ecosystems where they may contribute to biogeochemical cycles. Further studies on this bacterium could illuminate its specific functions and interactions within its habitat, highlighting the importance of such microbes in maintaining ecological balance.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacteriaceae bacterium TMED42 58545


Gene Summary

Adenine Count

758899 bp

Thymine Count

754556 bp

Guanine Count

486343 bp

Cytosine Count

487794 bp

Genome Length

2493049 bp

Protein-coding Genes

2280 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hsp20/alpha crystallin family proteinCBC02_000115Not AvailablePositive22853 - 2335018730.2
degq family serine endoproteaseCBC02_000120Not AvailablePositive23563 - 2503252278.2
Ncrna_class:rnase_p_rnaNot AvailableNot AvailablePositive24678 - 24974Not Available
atp-dependent chaperone clpbCBC02_000125Not AvailablePositive25133 - 2773696693.6
j domain-containing proteinCBC02_000130Not AvailablePositive27786 - 2873634850.0
merr family transcriptional regulatorCBC02_000135Not AvailablePositive28739 - 2905912153.6
peptidase m48CBC02_000140Not AvailablePositive29079 - 3004436155.3
mechanosensitive ion channel family proteinCBC02_000145Not AvailablePositive30052 - 3094833310.7
pas domain s-box proteinCBC02_000150Not AvailablePositive31097 - 3163921369.5
hypothetical proteinCBC02_000155Not AvailableNegative32244 - 3322735172.4

Displaying genes 21 – 30 of 538 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.