Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | /taxonomy?family=Flavobacteriaceae&kingdom=Pseudomonadati&klass=Flavobacteriia&level=genus&order=Flavobacteriales&phylum=Bacteroidota |
| Species | Flavobacteriaceae bacterium TMED42 |
| Strain | 58545 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
758899 bp
Thymine Count
754556 bp
Guanine Count
486343 bp
Cytosine Count
487794 bp
Genome Length
2493049 bp
Protein-coding Genes
2280 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent zinc metalloprotease ftsh | CBC02_000500 | Not Available | Negative | 109666 - 111639 | 73102.3 |
| ribosome silencing factor | CBC02_000505 | Not Available | Negative | 111646 - 112017 | 13826.3 |
| biotin--[acetyl-coa-carboxylase] ligase | CBC02_000510 | Not Available | Positive | 112076 - 112813 | 27441.4 |
| orotate phosphoribosyltransferase | CBC02_000515 | Not Available | Negative | 112810 - 113454 | 23915.7 |
| nudix domain-containing protein | CBC02_000520 | Not Available | Positive | 113428 - 114063 | 25055.9 |
| pantetheine-phosphate adenylyltransferase | CBC02_000525 | Not Available | Negative | 114065 - 114517 | 16983.7 |
| d-alanine--d-alanine ligase | CBC02_000530 | Not Available | Negative | 114522 - 115511 | 36373.4 |
| penicillin-binding protein | CBC02_000535 | Not Available | Positive | 115595 - 116149 | 20871.8 |
| rlua family pseudouridine synthase | CBC02_000540 | Not Available | Positive | 116133 - 117173 | 39378.0 |
| peroxide stress protein yaaa | CBC02_000545 | Not Available | Positive | 117250 - 118011 | 29228.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
