Methanosphaera stadtmanae strain PA5

CocciNon-motileAnaerobic

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Methanobacteria

Order

Methanobacteriales

Family

Methanobacteriaceae

Genus

Methanosphaera

Description

Methanosphaera stadtmanae strain PA5 is a species of cocci-shaped methanogen that thrives in the anaerobic environment of the oral cavity. This organism is characterized by its unique cell arrangement, forming pairs and tetrads. With an optimal growth temperature of 36°C, it falls within the mesophilic temperature range. As a lithotroph, Methanosphaera stadtmanae strain PA5 utilizes inorganic compounds as its energy source, enabling it to survive in environments where organic substrates may be limited. This metabolic strategy highlights its role in the microbial community of the oral cavity, where it contributes to the biogeochemical cycling of carbon through methanogenesis. Notably, this strain lacks mobility, indicating that it does not possess flagella, and it exists as a free-living organism. The genetic information for this strain is cataloged under the accession NGJK00000000.1, indicating its unique identity within microbial databases. The presence of Methanosphaera stadtmanae strain PA5 in the oral cavity underscores the complexity of microbial interactions in this habitat and suggests its potential impact on oral health and disease. Its anaerobic lifestyle and lithotrophic energy acquisition may influence the overall microbial ecology, contributing to the balance of microbial populations and the dynamics of methane production in the oral environment.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassMethanobacteria
OrderMethanobacteriales
FamilyMethanobacteriaceae
GenusMethanosphaera
SpeciesMethanosphaera stadtmanae
Strainstrain PA5

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperature36
Temperature rangeMesophilic
Habitatoral cavity
Biotic relationshipFree living
Host(s)Homo sapiens, Ceratotherium simum
Cell arrangementPairs- Tetrads
SporulationNot Available
Energy sourceLithotroph
PathogenicityNot Available

Genome Summary

Methanosphaera stadtmanae strain PA5 PA5_contig_130, whole genome

Gene Summary

Adenine Count

616882 bp

Thymine Count

614063 bp

Guanine Count

232058 bp

Cytosine Count

237628 bp

Genome Length

1701400 bp

Protein-coding Genes

1554 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ni-sirohydrochlorin a,c-diamide reductive cyclase atp-dependent reductase subunitCA615_05580Not AvailableNegative1208547 - 120933528525.1
peptidase u32CA615_05585Not AvailableNegative1209339 - 121055645807.9
amidophosphoribosyltransferaseCA615_05590Not AvailableNegative1210608 - 121199350878.8
multimeric flavodoxinCA615_05595Not AvailableNegative1212296 - 121285920800.0
hypothetical proteinCA615_05600Not AvailablePositive1213134 - 121400032599.4
hypothetical proteinCA615_05605Not AvailableNegative1214005 - 121476329019.5
hydroxylamine reductaseCA615_05610Not AvailablePositive1214907 - 121619347420.1
tigr01210 family radical sam proteinCA615_05615Not AvailableNegative1216212 - 121731842246.5
5,10-methylenetetrahydromethanopterin reductaseCA615_05620Not AvailableNegative1217331 - 121829934998.2
hypothetical proteinCA615_05625Not AvailableNegative1218509 - 1221430106232.0

Displaying genes 1101 – 1110 of 1596 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.