Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingosinicellaceae
Genus
Pacificimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingosinicellaceae |
| Genus | Pacificimonas |
| Species | Pacificimonas flava |
| Strain | strain JLT2012 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
597430 bp
Thymine Count
604320 bp
Guanine Count
1072352 bp
Cytosine Count
1078159 bp
Genome Length
3352426 bp
Protein-coding Genes
3047 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B5C34_00200 | Not Available | Negative | 38853 - 39542 | 24524.7 |
| diaminopimelate epimerase | B5C34_00205 | Not Available | Positive | 39593 - 40396 | 28650.4 |
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | B5C34_00210 | Not Available | Positive | 40414 - 41628 | 44565.7 |
| signal recognition particle-docking protein ftsy | B5C34_00215 | Not Available | Positive | 41647 - 42612 | 34392.3 |
| septation protein ispz | B5C34_00220 | Not Available | Positive | 42639 - 43259 | 22798.3 |
| hypothetical protein | B5C34_00225 | Not Available | Positive | 43286 - 44227 | 34379.8 |
| hypothetical protein | B5C34_00230 | Not Available | Negative | 44246 - 45739 | 55325.9 |
| superoxide dismutase | B5C34_00235 | Not Available | Negative | 46050 - 46667 | 22864.5 |
| phage shock protein operon transcriptional activator | B5C34_00240 | Not Available | Negative | 46765 - 47856 | 40184.2 |
| phage shock protein pspa | B5C34_00245 | Not Available | Positive | 48322 - 48999 | 25299.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
