Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingosinicellaceae
Genus
Pacificimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingosinicellaceae |
| Genus | Pacificimonas |
| Species | Pacificimonas flava |
| Strain | strain JLT2012 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
597430 bp
Thymine Count
604320 bp
Guanine Count
1072352 bp
Cytosine Count
1078159 bp
Genome Length
3352426 bp
Protein-coding Genes
3047 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B5C34_02200 | Not Available | Negative | 443895 - 445652 | 62228.8 |
| shikimate kinase | B5C34_02205 | Not Available | Positive | 445897 - 446451 | 19947.1 |
| 3-dehydroquinate synthase | B5C34_02210 | Not Available | Positive | 446445 - 447539 | 38362.2 |
| polyphenol oxidase | B5C34_02215 | Not Available | Positive | 447536 - 448309 | 27166.9 |
| phosphoribosylpyrophosphate synthetase | B5C34_02220 | Not Available | Positive | 448397 - 449323 | 33157.1 |
| antibiotic biosynthesis monooxygenase | B5C34_02225 | Not Available | Positive | 449328 - 449687 | 13092.3 |
| hypothetical protein | B5C34_02230 | Not Available | Negative | 449684 - 449926 | 8617.42 |
| l,d-transpeptidase | B5C34_02235 | Not Available | Negative | 449998 - 450951 | 34093.7 |
| hypothetical protein | B5C34_02240 | Not Available | Negative | 450975 - 451793 | 29673.5 |
| metal abc transporter permease | B5C34_02245 | Not Available | Positive | 451867 - 453711 | 67942.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
