Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingosinicellaceae
Genus
Pacificimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingosinicellaceae |
| Genus | Pacificimonas |
| Species | Pacificimonas flava |
| Strain | strain JLT2012 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
597430 bp
Thymine Count
604320 bp
Guanine Count
1072352 bp
Cytosine Count
1078159 bp
Genome Length
3352426 bp
Protein-coding Genes
3047 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | B5C34_02100 | Not Available | Positive | 426120 - 426647 | 19114.9 |
| peptide-methionine (s)-s-oxide reductase | B5C34_02105 | Not Available | Negative | 426709 - 427287 | 21259.5 |
| glycerophosphodiester phosphodiesterase | B5C34_02110 | Not Available | Positive | 427367 - 428398 | 37252.2 |
| acyl-coa synthetase | B5C34_02115 | Not Available | Positive | 428473 - 430065 | 58563.2 |
| acyl-coa dehydrogenase | B5C34_02120 | Not Available | Positive | 430103 - 431284 | 43436.3 |
| 3-isopropylmalate dehydratase large subunit | B5C34_02125 | Not Available | Positive | 431360 - 432772 | 50013.5 |
| 3-isopropylmalate dehydratase small subunit | B5C34_02130 | Not Available | Positive | 432927 - 433517 | 21652.7 |
| 3-isopropylmalate dehydrogenase | B5C34_02135 | Not Available | Positive | 433735 - 434790 | 37492.9 |
| hypothetical protein | B5C34_02140 | Not Available | Positive | 434790 - 435578 | 28573.1 |
| hypothetical protein | B5C34_02145 | Not Available | Negative | 435620 - 436381 | 26209.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
