Pacificimonas flava strain JLT2012

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingosinicellaceae

Genus

Pacificimonas

Description

Pacificimonas flava strain JLT2012 is characterized by having a single replicon, which is significant as it suggests a streamlined genomic organization. This strain is cataloged under the accession number NFZT00000000.1, which serves as a reference for its genomic data. The specific traits of Pacificimonas flava strain JLT2012 indicate its potential for adaptation to certain ecological niches. The presence of a single replicon may facilitate rapid replication and efficient metabolic processes, which could be advantageous in fluctuating environments. The streamlined genomic organization might also reflect evolutionary adaptations that enhance survival and proliferation under specific conditions. While details regarding its habitat, metabolic capabilities, or interactions with other organisms are not provided, the characteristics of Pacificimonas flava strain JLT2012 suggest it may occupy a specialized ecological role. Understanding the genomic structure and traits of this strain can contribute to broader insights into microbial diversity and the ecological dynamics of the environments where such organisms thrive.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingosinicellaceae
GenusPacificimonas
SpeciesPacificimonas flava
Strainstrain JLT2012

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pacificimonas flava strain JLT2012 scaffold7, whole genome shotgun

Gene Summary

Adenine Count

597430 bp

Thymine Count

604320 bp

Guanine Count

1072352 bp

Cytosine Count

1078159 bp

Genome Length

3352426 bp

Protein-coding Genes

3047 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gnat family n-acetyltransferaseB5C34_02100Not AvailablePositive426120 - 42664719114.9
peptide-methionine (s)-s-oxide reductaseB5C34_02105Not AvailableNegative426709 - 42728721259.5
glycerophosphodiester phosphodiesteraseB5C34_02110Not AvailablePositive427367 - 42839837252.2
acyl-coa synthetaseB5C34_02115Not AvailablePositive428473 - 43006558563.2
acyl-coa dehydrogenaseB5C34_02120Not AvailablePositive430103 - 43128443436.3
3-isopropylmalate dehydratase large subunitB5C34_02125Not AvailablePositive431360 - 43277250013.5
3-isopropylmalate dehydratase small subunitB5C34_02130Not AvailablePositive432927 - 43351721652.7
3-isopropylmalate dehydrogenaseB5C34_02135Not AvailablePositive433735 - 43479037492.9
hypothetical proteinB5C34_02140Not AvailablePositive434790 - 43557828573.1
hypothetical proteinB5C34_02145Not AvailableNegative435620 - 43638126209.8

Displaying genes 461 – 470 of 3125 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.