Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingosinicellaceae
Genus
Pacificimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingosinicellaceae |
| Genus | Pacificimonas |
| Species | Pacificimonas flava |
| Strain | strain JLT2012 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
597430 bp
Thymine Count
604320 bp
Guanine Count
1072352 bp
Cytosine Count
1078159 bp
Genome Length
3352426 bp
Protein-coding Genes
3047 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase subunit i | B5C34_01700 | Not Available | Positive | 343342 - 345006 | 60918.1 |
| protoheme ix farnesyltransferase | B5C34_01705 | Not Available | Positive | 345006 - 345956 | 33326.7 |
| cytochrome c oxidase assembly protein | B5C34_01710 | Not Available | Positive | 346078 - 346641 | 20665.5 |
| cytochrome c oxidase subunit 3 | B5C34_01715 | Not Available | Positive | 346644 - 347477 | 30815.4 |
| hypothetical protein | B5C34_01720 | Not Available | Positive | 347483 - 347890 | 14474.5 |
| hypothetical protein | B5C34_01725 | Not Available | Positive | 347887 - 348534 | 23759.7 |
| threonine synthase | B5C34_01730 | Not Available | Positive | 348559 - 349956 | 50198.9 |
| hypothetical protein | B5C34_01735 | Not Available | Positive | 349956 - 351185 | 44015.4 |
| sam-dependent methyltransferase | B5C34_01740 | Not Available | Positive | 351182 - 352042 | 32314.5 |
| hypothetical protein | B5C34_01745 | Not Available | Negative | 352053 - 353705 | 59079.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
