Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingosinicellaceae
Genus
Pacificimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingosinicellaceae |
| Genus | Pacificimonas |
| Species | Pacificimonas flava |
| Strain | strain JLT2012 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
597430 bp
Thymine Count
604320 bp
Guanine Count
1072352 bp
Cytosine Count
1078159 bp
Genome Length
3352426 bp
Protein-coding Genes
3047 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome-c oxidase, cbb3-type subunit ii | B5C34_15465 | Not Available | Negative | 3268839 - 3269576 | 27810.8 |
| cytochrome-c oxidase, cbb3-type subunit i | B5C34_15470 | Not Available | Negative | 3269588 - 3271243 | 62146.4 |
| pyridine nucleotide-disulfide oxidoreductase | B5C34_15475 | Not Available | Negative | 3271379 - 3272623 | 44204.8 |
| hypothetical protein | B5C34_15480 | Not Available | Negative | 3272718 - 3274103 | 49701.2 |
| arginase | B5C34_15485 | Not Available | Negative | 3274106 - 3275449 | 49451.5 |
| hypothetical protein | B5C34_15490 | Not Available | Positive | 3275767 - 3279288 | 126976.0 |
| dna-binding response regulator | B5C34_15495 | Not Available | Negative | 3279391 - 3280302 | 33236.1 |
| hybrid sensor histidine kinase/response regulator | B5C34_15500 | Not Available | Negative | 3280295 - 3283687 | 121753.0 |
| urease accessory protein ureg | B5C34_15505 | Not Available | Negative | 3283684 - 3284346 | 23513.2 |
| urease accessory protein uref | B5C34_15510 | Not Available | Negative | 3284343 - 3285023 | 24236.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
