Pacificimonas flava strain JLT2012

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingosinicellaceae

Genus

Pacificimonas

Description

Pacificimonas flava strain JLT2012 is characterized by having a single replicon, which is significant as it suggests a streamlined genomic organization. This strain is cataloged under the accession number NFZT00000000.1, which serves as a reference for its genomic data. The specific traits of Pacificimonas flava strain JLT2012 indicate its potential for adaptation to certain ecological niches. The presence of a single replicon may facilitate rapid replication and efficient metabolic processes, which could be advantageous in fluctuating environments. The streamlined genomic organization might also reflect evolutionary adaptations that enhance survival and proliferation under specific conditions. While details regarding its habitat, metabolic capabilities, or interactions with other organisms are not provided, the characteristics of Pacificimonas flava strain JLT2012 suggest it may occupy a specialized ecological role. Understanding the genomic structure and traits of this strain can contribute to broader insights into microbial diversity and the ecological dynamics of the environments where such organisms thrive.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingosinicellaceae
GenusPacificimonas
SpeciesPacificimonas flava
Strainstrain JLT2012

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pacificimonas flava strain JLT2012 scaffold7, whole genome shotgun

Gene Summary

Adenine Count

597430 bp

Thymine Count

604320 bp

Guanine Count

1072352 bp

Cytosine Count

1078159 bp

Genome Length

3352426 bp

Protein-coding Genes

3047 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyridoxamine 5'-phosphate oxidaseB5C34_15055Not AvailableNegative3175804 - 317639422852.7
molecular chaperone dnajB5C34_15060Not AvailablePositive3176564 - 317756835543.8
hypothetical proteinB5C34_15065Not AvailablePositive3177660 - 317847529525.7
enoyl-[acyl-carrier-protein] reductaseB5C34_15070Not AvailablePositive3178472 - 317927528899.6
hypothetical proteinB5C34_15075Not AvailablePositive3179396 - 318049640037.1
homoserine dehydrogenaseB5C34_15080Not AvailableNegative3180462 - 318175144725.7
diguanylate phosphodiesteraseB5C34_15085Not AvailablePositive3181993 - 318272426510.6
aminotransferaseB5C34_15090Not AvailableNegative3182693 - 318388944087.8
class i poly(r)-hydroxyalkanoic acid synthaseB5C34_15095Not AvailablePositive3184006 - 318583568010.4
hypothetical proteinB5C34_15100Not AvailablePositive3185976 - 318711241231.3

Displaying genes 2981 – 2990 of 3125 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.