Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingosinicellaceae
Genus
Pacificimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingosinicellaceae |
| Genus | Pacificimonas |
| Species | Pacificimonas flava |
| Strain | strain JLT2012 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
597430 bp
Thymine Count
604320 bp
Guanine Count
1072352 bp
Cytosine Count
1078159 bp
Genome Length
3352426 bp
Protein-coding Genes
3047 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tlya family rrna (cytidine-2'-o)-methyltransferase | B5C34_11775 | Not Available | Positive | 2452933 - 2453679 | 26212.5 |
| Trna-leu | Not Available | Not Available | Positive | 2453752 - 2453838 | Not Available |
| trigger factor | B5C34_11785 | Not Available | Positive | 2453889 - 2455526 | 59662.6 |
| atp-dependent clp endopeptidase, proteolytic subunit clpp | B5C34_11790 | Not Available | Positive | 2455621 - 2456262 | 23625.3 |
| atpase | B5C34_11795 | Not Available | Negative | 2456259 - 2457056 | 28725.2 |
| preprotein translocase subunit yajc | B5C34_11800 | Not Available | Positive | 2457116 - 2457448 | 11678.5 |
| protein translocase subunit secd | B5C34_11805 | Not Available | Positive | 2457467 - 2459059 | 57381.7 |
| protein translocase subunit secf | B5C34_11810 | Not Available | Positive | 2459056 - 2460012 | 34473.3 |
| hypothetical protein | B5C34_11815 | Not Available | Positive | 2460022 - 2460408 | 13774.5 |
| hypothetical protein | B5C34_11820 | Not Available | Negative | 2460395 - 2461546 | 41396.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
