Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingosinicellaceae
Genus
Pacificimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingosinicellaceae |
| Genus | Pacificimonas |
| Species | Pacificimonas flava |
| Strain | strain JLT2012 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
597430 bp
Thymine Count
604320 bp
Guanine Count
1072352 bp
Cytosine Count
1078159 bp
Genome Length
3352426 bp
Protein-coding Genes
3047 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine--trna ligase | B5C34_11520 | Not Available | Negative | 2402313 - 2403533 | 44438.9 |
| anhydro-n-acetylmuramic acid kinase | B5C34_11525 | Not Available | Positive | 2403590 - 2404672 | 38336.4 |
| hypothetical protein | B5C34_11530 | Not Available | Positive | 2404732 - 2405043 | 10985.3 |
| alpha/beta hydrolase | B5C34_11540 | Not Available | Negative | 2405870 - 2406523 | 23885.6 |
| cysteine desulfurase | B5C34_11545 | Not Available | Positive | 2406636 - 2407712 | 36594.5 |
| iscs subfamily cysteine desulfurase | B5C34_11550 | Not Available | Positive | 2407709 - 2408842 | 39782.6 |
| 2fe-2s ferredoxin | B5C34_11555 | Not Available | Positive | 2408839 - 2409171 | 11599.6 |
| indolepyruvate ferredoxin oxidoreductase | B5C34_11560 | Not Available | Positive | 2409240 - 2412716 | 127407.0 |
| pyrroline-5-carboxylate reductase | B5C34_11565 | Not Available | Positive | 2412768 - 2413565 | 27875.2 |
| marr family transcriptional regulator | B5C34_11570 | Not Available | Negative | 2413603 - 2414085 | 18301.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
