Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingosinicellaceae
Genus
Pacificimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingosinicellaceae |
| Genus | Pacificimonas |
| Species | Pacificimonas flava |
| Strain | strain JLT2012 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
597430 bp
Thymine Count
604320 bp
Guanine Count
1072352 bp
Cytosine Count
1078159 bp
Genome Length
3352426 bp
Protein-coding Genes
3047 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trbe | B5C34_10815 | Not Available | Positive | 2257046 - 2259481 | 89047.0 |
| conjugal transfer protein trbj | B5C34_10820 | Not Available | Positive | 2259478 - 2260194 | 25418.2 |
| hypothetical protein | B5C34_10825 | Not Available | Positive | 2260199 - 2260450 | 8692.54 |
| p-type conjugative transfer protein trbl | B5C34_10830 | Not Available | Positive | 2260447 - 2261751 | 42967.2 |
| conjugal transfer protein trbf | B5C34_10835 | Not Available | Positive | 2261757 - 2262440 | 25267.9 |
| p-type conjugative transfer protein trbg | B5C34_10840 | Not Available | Positive | 2262437 - 2263453 | 36545.6 |
| conjugal transfer protein trai | B5C34_10845 | Not Available | Positive | 2263450 - 2264673 | 42988.2 |
| hypothetical protein | B5C34_10850 | Not Available | Positive | 2264670 - 2264891 | 8008.87 |
| hypothetical protein | B5C34_10855 | Not Available | Negative | 2264907 - 2265215 | 10701.8 |
| hypothetical protein | B5C34_10860 | Not Available | Negative | 2265248 - 2266294 | 37988.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
