Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingosinicellaceae
Genus
Pacificimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingosinicellaceae |
| Genus | Pacificimonas |
| Species | Pacificimonas flava |
| Strain | strain JLT2012 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
597430 bp
Thymine Count
604320 bp
Guanine Count
1072352 bp
Cytosine Count
1078159 bp
Genome Length
3352426 bp
Protein-coding Genes
3047 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exopolyphosphatase | B5C34_09580 | Not Available | Positive | 1996241 - 1997269 | 37672.6 |
| rrna methyltransferase | B5C34_09585 | Not Available | Positive | 1997266 - 1997952 | 24443.4 |
| peptidase m28 | B5C34_09590 | Not Available | Positive | 1998052 - 1999722 | 60731.8 |
| agmatine deiminase | B5C34_09595 | Not Available | Positive | 1999719 - 2000690 | 35316.5 |
| n-carbamoylputrescine amidase | B5C34_09600 | Not Available | Positive | 2000722 - 2001570 | 31513.8 |
| hypothetical protein | B5C34_09605 | Not Available | Negative | 2001463 - 2002368 | 31847.6 |
| acyl-coa synthetase | B5C34_09610 | Not Available | Negative | 2002464 - 2003990 | 56129.1 |
| delta-aminolevulinic acid dehydratase | B5C34_09615 | Not Available | Negative | 2004116 - 2005108 | 35687.7 |
| glutamate racemase | B5C34_09620 | Not Available | Positive | 2005107 - 2005946 | 29327.4 |
| cytosolic protein | B5C34_09625 | Not Available | Positive | 2005965 - 2006423 | 16511.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
