Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingosinicellaceae
Genus
Pacificimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingosinicellaceae |
| Genus | Pacificimonas |
| Species | Pacificimonas flava |
| Strain | strain JLT2012 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
597430 bp
Thymine Count
604320 bp
Guanine Count
1072352 bp
Cytosine Count
1078159 bp
Genome Length
3352426 bp
Protein-coding Genes
3047 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate-5-semialdehyde dehydrogenase | B5C34_00600 | Not Available | Positive | 111418 - 112668 | 43788.6 |
| Trna-ala | Not Available | Not Available | Positive | 112789 - 112864 | Not Available |
| tigr02300 family protein | B5C34_00610 | Not Available | Negative | 112986 - 113312 | 11902.1 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | B5C34_00615 | Not Available | Positive | 113480 - 114808 | 45708.4 |
| udp-n-acetylglucosamine 2-epimerase (non-hydrolyzing) | B5C34_00620 | Not Available | Negative | 114981 - 116162 | 42790.1 |
| cytidylate kinase | B5C34_00625 | Not Available | Positive | 116149 - 116781 | 22046.0 |
| 30s ribosomal protein s1 | B5C34_00630 | Not Available | Positive | 117021 - 118727 | 61871.1 |
| integration host factor subunit beta | B5C34_00635 | Not Available | Positive | 118887 - 119171 | 10471.5 |
| hypothetical protein | B5C34_00640 | Not Available | Positive | 119257 - 119607 | 13006.1 |
| orotidine-5'-phosphate decarboxylase | B5C34_00645 | Not Available | Positive | 119604 - 120287 | 23581.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
