Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingosinicellaceae
Genus
Pacificimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingosinicellaceae |
| Genus | Pacificimonas |
| Species | Pacificimonas flava |
| Strain | strain JLT2012 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
597430 bp
Thymine Count
604320 bp
Guanine Count
1072352 bp
Cytosine Count
1078159 bp
Genome Length
3352426 bp
Protein-coding Genes
3047 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosidase | B5C34_08020 | Not Available | Positive | 1650635 - 1651156 | 19274.1 |
| s26 family signal peptidase | B5C34_08025 | Not Available | Positive | 1651153 - 1651698 | 19899.0 |
| hypothetical protein | B5C34_08030 | Not Available | Positive | 1651766 - 1652104 | 12298.3 |
| lytic transglycosylase | B5C34_08035 | Not Available | Positive | 1652108 - 1652878 | 27158.4 |
| type vi secretion protein | B5C34_08040 | Not Available | Positive | 1653122 - 1654861 | 64094.2 |
| conjugal transfer protein trag | B5C34_08045 | Not Available | Positive | 1654885 - 1656864 | 73232.9 |
| copg family transcriptional regulator | B5C34_08050 | Not Available | Positive | 1656870 - 1657301 | 16008.2 |
| hypothetical protein | B5C34_08055 | Not Available | Negative | 1657402 - 1658388 | 37272.7 |
| hypothetical protein | B5C34_08060 | Not Available | Negative | 1658385 - 1658708 | 12043.3 |
| hypothetical protein | B5C34_08065 | Not Available | Negative | 1658854 - 1659432 | 20973.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
