Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingosinicellaceae
Genus
Pacificimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingosinicellaceae |
| Genus | Pacificimonas |
| Species | Pacificimonas flava |
| Strain | strain JLT2012 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
597430 bp
Thymine Count
604320 bp
Guanine Count
1072352 bp
Cytosine Count
1078159 bp
Genome Length
3352426 bp
Protein-coding Genes
3047 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coproporphyrinogen iii oxidase | B5C34_06020 | Not Available | Positive | 1247736 - 1248593 | 32001.3 |
| hypothetical protein | B5C34_06025 | Not Available | Negative | 1248614 - 1249297 | 23956.6 |
| glycine cleavage system protein t | B5C34_06030 | Not Available | Positive | 1249680 - 1250783 | 39581.2 |
| glycine cleavage system protein h | B5C34_06035 | Not Available | Positive | 1250802 - 1251173 | 13279.3 |
| sam-dependent methyltransferase | B5C34_06040 | Not Available | Positive | 1251170 - 1251913 | 26302.1 |
| glycine dehydrogenase (aminomethyl-transferring) | B5C34_06045 | Not Available | Positive | 1251927 - 1253294 | 49133.6 |
| glycine dehydrogenase (aminomethyl-transferring) | B5C34_06050 | Not Available | Positive | 1253291 - 1254856 | 55920.1 |
| hypothetical protein | B5C34_06055 | Not Available | Positive | 1254947 - 1257475 | 92469.5 |
| hypothetical protein | B5C34_06060 | Not Available | Negative | 1257472 - 1258569 | 38784.2 |
| sigma-54-dependent fis family transcriptional regulator | B5C34_06065 | Not Available | Negative | 1258656 - 1260098 | 51143.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
