Pacificimonas flava strain JLT2012

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingosinicellaceae

Genus

Pacificimonas

Description

Pacificimonas flava strain JLT2012 is characterized by having a single replicon, which is significant as it suggests a streamlined genomic organization. This strain is cataloged under the accession number NFZT00000000.1, which serves as a reference for its genomic data. The specific traits of Pacificimonas flava strain JLT2012 indicate its potential for adaptation to certain ecological niches. The presence of a single replicon may facilitate rapid replication and efficient metabolic processes, which could be advantageous in fluctuating environments. The streamlined genomic organization might also reflect evolutionary adaptations that enhance survival and proliferation under specific conditions. While details regarding its habitat, metabolic capabilities, or interactions with other organisms are not provided, the characteristics of Pacificimonas flava strain JLT2012 suggest it may occupy a specialized ecological role. Understanding the genomic structure and traits of this strain can contribute to broader insights into microbial diversity and the ecological dynamics of the environments where such organisms thrive.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingosinicellaceae
GenusPacificimonas
SpeciesPacificimonas flava
Strainstrain JLT2012

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pacificimonas flava strain JLT2012 scaffold7, whole genome shotgun

Gene Summary

Adenine Count

597430 bp

Thymine Count

604320 bp

Guanine Count

1072352 bp

Cytosine Count

1078159 bp

Genome Length

3352426 bp

Protein-coding Genes

3047 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
coproporphyrinogen iii oxidaseB5C34_06020Not AvailablePositive1247736 - 124859332001.3
hypothetical proteinB5C34_06025Not AvailableNegative1248614 - 124929723956.6
glycine cleavage system protein tB5C34_06030Not AvailablePositive1249680 - 125078339581.2
glycine cleavage system protein hB5C34_06035Not AvailablePositive1250802 - 125117313279.3
sam-dependent methyltransferaseB5C34_06040Not AvailablePositive1251170 - 125191326302.1
glycine dehydrogenase (aminomethyl-transferring)B5C34_06045Not AvailablePositive1251927 - 125329449133.6
glycine dehydrogenase (aminomethyl-transferring)B5C34_06050Not AvailablePositive1253291 - 125485655920.1
hypothetical proteinB5C34_06055Not AvailablePositive1254947 - 125747592469.5
hypothetical proteinB5C34_06060Not AvailableNegative1257472 - 125856938784.2
sigma-54-dependent fis family transcriptional regulatorB5C34_06065Not AvailableNegative1258656 - 126009851143.2

Displaying genes 1201 – 1210 of 3125 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.