Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingosinicellaceae
Genus
Pacificimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingosinicellaceae |
| Genus | Pacificimonas |
| Species | Pacificimonas flava |
| Strain | strain JLT2012 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
597430 bp
Thymine Count
604320 bp
Guanine Count
1072352 bp
Cytosine Count
1078159 bp
Genome Length
3352426 bp
Protein-coding Genes
3047 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal recognition particle protein | B5C34_05870 | Not Available | Negative | 1210010 - 1211467 | 51527.8 |
| 8-amino-7-oxononanoate synthase | B5C34_05875 | Not Available | Positive | 1211806 - 1212960 | 40656.1 |
| dethiobiotin synthase | B5C34_05880 | Not Available | Positive | 1212957 - 1213586 | 22417.1 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | B5C34_05885 | Not Available | Positive | 1213583 - 1214833 | 44990.1 |
| sodium:proton antiporter | B5C34_05890 | Not Available | Positive | 1214880 - 1216142 | 44016.3 |
| pas domain-containing sensor histidine kinase | B5C34_05895 | Not Available | Positive | 1216224 - 1217267 | 38789.9 |
| glyoxalase | B5C34_05900 | Not Available | Negative | 1217300 - 1217716 | 15168.5 |
| redox-sensitive transcriptional activator soxr | B5C34_05905 | Not Available | Positive | 1217877 - 1218359 | 17677.6 |
| hypothetical protein | B5C34_05910 | Not Available | Positive | 1218308 - 1219084 | 28323.6 |
| thiamine pyrophosphate-binding protein | B5C34_05915 | Not Available | Negative | 1219195 - 1220826 | 57062.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
