Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingosinicellaceae
Genus
Pacificimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingosinicellaceae |
| Genus | Pacificimonas |
| Species | Pacificimonas flava |
| Strain | strain JLT2012 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
597430 bp
Thymine Count
604320 bp
Guanine Count
1072352 bp
Cytosine Count
1078159 bp
Genome Length
3352426 bp
Protein-coding Genes
3047 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylglucosamine 2-epimerase (non-hydrolyzing) | B5C34_04975 | Not Available | Negative | 1034484 - 1035638 | 43741.1 |
| capsule biosynthesis protein capf | B5C34_04980 | Not Available | Negative | 1035649 - 1036764 | 40467.4 |
| udp-glucose 4-epimerase | B5C34_04985 | Not Available | Negative | 1036761 - 1037786 | 37986.3 |
| hypothetical protein | B5C34_04990 | Not Available | Positive | 1037966 - 1038646 | 24845.0 |
| adenylosuccinate lyase | B5C34_04995 | Not Available | Positive | 1038728 - 1040029 | 48802.4 |
| peptide-methionine (r)-s-oxide reductase | B5C34_05000 | Not Available | Positive | 1040155 - 1040589 | 15877.5 |
| dihydrolipoamide dehydrogenase | B5C34_05005 | Not Available | Positive | 1040968 - 1042368 | 49608.4 |
| peptidase m20 | B5C34_05010 | Not Available | Positive | 1042416 - 1043729 | 46483.6 |
| hypothetical protein | B5C34_05015 | Not Available | Negative | 1043730 - 1044347 | 21281.4 |
| sam-dependent methyltransferase | B5C34_05020 | Not Available | Positive | 1044409 - 1045677 | 47611.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
