Paenibacillus odorifer strain VTT E-133288

Gram-positiveRodMotileFacultative Anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Paenibacillus

Description

Paenibacillus odorifer strain VTT E-133288 is a Gram-positive, rod-shaped bacterium characterized by its ability to form chains. This strain is a chemoheterotroph, meaning it derives energy from organic compounds, and it can thrive in both aerobic and anaerobic environments, classifying it as a facultative anaerobe. P. odorifer exhibits mobility, facilitated by the presence of flagella, and is classified as sporulating, allowing it to endure adverse conditions. The optimal growth temperature for strain VTT E-133288 is 30°C, placing it within the mesophilic temperature range. It possesses a single replicon, which is a common feature among many bacteria, ensuring efficient replication and maintenance of its genetic material. Notably, this strain has been associated with Homo sapiens, indicating its relevance in human-associated environments. The diverse habitats of P. odorifer strain VTT E-133288 suggest its ecological versatility and adaptability, potentially allowing it to inhabit various niches where organic matter is available. This adaptability can play a significant role in nutrient cycling and may contribute to the microbial dynamics in environments influenced by human activity. Understanding the ecological roles of such bacteria can provide insights into their contributions to biogeochemical processes, especially in human-impacted ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus odorifer
Strainstrain VTT E-133288

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Paenibacillus odorifer strain VTT E-133288
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative Anaerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementChains
SporulationSporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Paenibacillus odorifer strain VTT E-133288

Gene Summary

Adenine Count

1898059 bp

Thymine Count

1901658 bp

Guanine Count

1482386 bp

Cytosine Count

1520669 bp

Genome Length

6802822 bp

Protein-coding Genes

5882 genes

Non-Coding Genes

40 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
heme abc transporter atp-binding proteinCA596_14585Not AvailableNegative3277423 - 327912963161.8
duf3816 family proteinCA596_14590Not AvailableNegative3279212 - 327977219673.5
hypothetical proteinCA596_14595Not AvailableNegative3279924 - 328214977899.3
branched-chain amino acid transporter azlcCA596_14600Not AvailablePositive3282359 - 328309326121.5
branched-chain amino acid abc transporterCA596_14605Not AvailablePositive3283084 - 328341012207.6
trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtabCA596_14610Not AvailableNegative3283754 - 328509750563.3
16s rrna (uracil(1498)-n(3))-methyltransferaseCA596_14615Not AvailableNegative3285101 - 328586528006.7
site-2 protease family proteinCA596_14620Not AvailableNegative3286045 - 328672825669.9
50s ribosomal protein l11 methyltransferaseCA596_14625Not AvailableNegative3286731 - 328778338193.1
dna-3-methyladenine glycosylaseCA596_14630Not AvailableNegative3287929 - 328850721893.1

Displaying genes 2911 – 2920 of 5922 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.