Paenibacillus odorifer strain VTT E-133288

Gram-positiveRodMotileFacultative Anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Paenibacillaceae

Genus

Paenibacillus

Description

Paenibacillus odorifer strain VTT E-133288 is a Gram-positive, rod-shaped bacterium characterized by its ability to form chains. This strain is a chemoheterotroph, meaning it derives energy from organic compounds, and it can thrive in both aerobic and anaerobic environments, classifying it as a facultative anaerobe. P. odorifer exhibits mobility, facilitated by the presence of flagella, and is classified as sporulating, allowing it to endure adverse conditions. The optimal growth temperature for strain VTT E-133288 is 30°C, placing it within the mesophilic temperature range. It possesses a single replicon, which is a common feature among many bacteria, ensuring efficient replication and maintenance of its genetic material. Notably, this strain has been associated with Homo sapiens, indicating its relevance in human-associated environments. The diverse habitats of P. odorifer strain VTT E-133288 suggest its ecological versatility and adaptability, potentially allowing it to inhabit various niches where organic matter is available. This adaptability can play a significant role in nutrient cycling and may contribute to the microbial dynamics in environments influenced by human activity. Understanding the ecological roles of such bacteria can provide insights into their contributions to biogeochemical processes, especially in human-impacted ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus odorifer
Strainstrain VTT E-133288

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Paenibacillus odorifer strain VTT E-133288
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative Anaerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementChains
SporulationSporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Paenibacillus odorifer strain VTT E-133288

Gene Summary

Adenine Count

1898059 bp

Thymine Count

1901658 bp

Guanine Count

1482386 bp

Cytosine Count

1520669 bp

Genome Length

6802822 bp

Protein-coding Genes

5882 genes

Non-Coding Genes

40 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rna-binding proteinCA596_13225Not AvailableNegative2964045 - 296456619941.9
23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmbCA596_13230Not AvailableNegative2964569 - 296533327507.4
ribonuclease iiiCA596_13235Not AvailableNegative2965370 - 296580416338.6
cysteine--trna ligaseCA596_13240Not AvailableNegative2965801 - 296720753258.9
serine o-acetyltransferaseCA596_13245Not AvailableNegative2967257 - 296794925666.8
glutamate--trna ligaseCA596_13250Not AvailableNegative2968503 - 296996655297.7
2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthaseCA596_13255Not AvailableNegative2970018 - 297050617189.8
2-c-methyl-d-erythritol 4-phosphate cytidylyltransferaseCA596_13260Not AvailableNegative2970503 - 297120125779.7
pin/tram domain-containing proteinCA596_13265Not AvailableNegative2971297 - 297238539406.4
cdp-diacylglycerol--serine o-phosphatidyltransferaseCA596_13270Not AvailableNegative2972565 - 297330226525.4

Displaying genes 2641 – 2650 of 5922 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.