Chitinophagaceae bacterium IBVUCB1

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Description

Chitinophagaceae bacterium IBVUCB1 is a member of the Chitinophagaceae family, characterized by a single replicon in its genetic structure. The genomic data for this bacterium is accessible under the accession number NFUW00000000.1. The Chitinophagaceae family is known for its members' roles in the degradation of chitin, a significant polysaccharide found in the exoskeletons of arthropods and the cell walls of fungi. This indicates that Chitinophagaceae bacterium IBVUCB1 may play a role in the decomposition of chitinous materials, contributing to nutrient cycling in its environment. Understanding the specific functions and ecological roles of Chitinophagaceae bacterium IBVUCB1 can provide insights into the broader ecological dynamics of soil and aquatic ecosystems, particularly in relation to organic matter decomposition and nutrient availability.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrhizospheric
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chitinophagaceae bacterium IBVUCB1 contig000002, whole genome

Gene Summary

Adenine Count

978891 bp

Thymine Count

974886 bp

Guanine Count

725582 bp

Cytosine Count

727483 bp

Genome Length

3412171 bp

Protein-coding Genes

3056 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-deoxy-7-phosphoheptulonate synthaseCAP35_02780Not AvailablePositive633153 - 63423240216.6
sam-dependent methyltransferaseCAP35_02785Not AvailablePositive634268 - 63505630669.6
shikimate dehydrogenaseCAP35_02790Not AvailableNegative635046 - 63577726661.8
phosphosulfolactate synthaseCAP35_02795Not AvailableNegative635840 - 63661328809.7
hypothetical proteinCAP35_02800Not AvailablePositive636717 - 63701011086.4
lipid-a-disaccharide synthaseCAP35_02805Not AvailablePositive637012 - 63810941296.7
choline monooxygenaseCAP35_02810Not AvailableNegative638106 - 63918541480.5
Trna-alaNot AvailableNot AvailablePositive639264 - 639340Not Available
oxidoreductaseCAP35_02820Not AvailablePositive639611 - 64029724040.1
tigr03643 family proteinCAP35_02825Not AvailablePositive640301 - 64057910921.4

Displaying genes 561 – 570 of 3101 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.