Chitinophagaceae bacterium IBVUCB1

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Description

Chitinophagaceae bacterium IBVUCB1 is a member of the Chitinophagaceae family, characterized by a single replicon in its genetic structure. The genomic data for this bacterium is accessible under the accession number NFUW00000000.1. The Chitinophagaceae family is known for its members' roles in the degradation of chitin, a significant polysaccharide found in the exoskeletons of arthropods and the cell walls of fungi. This indicates that Chitinophagaceae bacterium IBVUCB1 may play a role in the decomposition of chitinous materials, contributing to nutrient cycling in its environment. Understanding the specific functions and ecological roles of Chitinophagaceae bacterium IBVUCB1 can provide insights into the broader ecological dynamics of soil and aquatic ecosystems, particularly in relation to organic matter decomposition and nutrient availability.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrhizospheric
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chitinophagaceae bacterium IBVUCB1 contig000002, whole genome

Gene Summary

Adenine Count

978891 bp

Thymine Count

974886 bp

Guanine Count

725582 bp

Cytosine Count

727483 bp

Genome Length

3412171 bp

Protein-coding Genes

3056 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
short-chain dehydrogenaseCAP35_07140Not AvailableNegative1606647 - 160735125231.2
atp-binding proteinCAP35_07145Not AvailablePositive1607394 - 160810426646.8
hypothetical proteinCAP35_07150Not AvailablePositive1608134 - 160884126604.2
protein-l-isoaspartate o-methyltransferaseCAP35_07155Not AvailablePositive1608905 - 160957025006.3
trna epoxyqueuosine(34) reductase quegCAP35_07160Not AvailableNegative1609982 - 161091134910.9
yigz family proteinCAP35_07165Not AvailableNegative1610911 - 161151622294.8
hypothetical proteinCAP35_07170Not AvailableNegative1611509 - 161237831645.1
riboflavin biosynthesis protein ribdCAP35_07175Not AvailableNegative1612375 - 161344540443.4
protein-(glutamine-n5) methyltransferase, release factor-specificCAP35_07180Not AvailablePositive1613499 - 161435931521.6
hypothetical proteinCAP35_07185Not AvailableNegative1614412 - 161590858251.5

Displaying genes 1431 – 1440 of 3101 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.