Chitinophagaceae bacterium IBVUCB1

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Description

Chitinophagaceae bacterium IBVUCB1 is a member of the Chitinophagaceae family, characterized by a single replicon in its genetic structure. The genomic data for this bacterium is accessible under the accession number NFUW00000000.1. The Chitinophagaceae family is known for its members' roles in the degradation of chitin, a significant polysaccharide found in the exoskeletons of arthropods and the cell walls of fungi. This indicates that Chitinophagaceae bacterium IBVUCB1 may play a role in the decomposition of chitinous materials, contributing to nutrient cycling in its environment. Understanding the specific functions and ecological roles of Chitinophagaceae bacterium IBVUCB1 can provide insights into the broader ecological dynamics of soil and aquatic ecosystems, particularly in relation to organic matter decomposition and nutrient availability.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrhizospheric
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chitinophagaceae bacterium IBVUCB1 contig000002, whole genome

Gene Summary

Adenine Count

978891 bp

Thymine Count

974886 bp

Guanine Count

725582 bp

Cytosine Count

727483 bp

Genome Length

3412171 bp

Protein-coding Genes

3056 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
reactive intermediate/imine deaminaseCAP35_05875Not AvailableNegative1325371 - 132575113716.6
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsabCAP35_05880Not AvailablePositive1325795 - 132648124939.5
transcriptional regulatorCAP35_05885Not AvailablePositive1326647 - 132700913766.8
gnat family n-acetyltransferaseCAP35_05890Not AvailableNegative1327064 - 132751617294.9
two-component system response regulatorCAP35_05895Not AvailablePositive1327675 - 132923760127.0
hypothetical proteinCAP35_05900Not AvailablePositive1329334 - 133032637339.2
hypothetical proteinCAP35_05905Not AvailablePositive1330319 - 133234979699.1
nadph:quinone reductaseCAP35_05910Not AvailableNegative1332352 - 133293622471.6
camp-binding proteinCAP35_05915Not AvailableNegative1332994 - 133358722724.3
cobyrinic acid a,c-diamide synthaseCAP35_05920Not AvailablePositive1333696 - 133443628210.0

Displaying genes 1181 – 1190 of 3101 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.