Chitinophagaceae bacterium IBVUCB1

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Description

Chitinophagaceae bacterium IBVUCB1 is a member of the Chitinophagaceae family, characterized by a single replicon in its genetic structure. The genomic data for this bacterium is accessible under the accession number NFUW00000000.1. The Chitinophagaceae family is known for its members' roles in the degradation of chitin, a significant polysaccharide found in the exoskeletons of arthropods and the cell walls of fungi. This indicates that Chitinophagaceae bacterium IBVUCB1 may play a role in the decomposition of chitinous materials, contributing to nutrient cycling in its environment. Understanding the specific functions and ecological roles of Chitinophagaceae bacterium IBVUCB1 can provide insights into the broader ecological dynamics of soil and aquatic ecosystems, particularly in relation to organic matter decomposition and nutrient availability.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrhizospheric
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chitinophagaceae bacterium IBVUCB1 contig000002, whole genome

Gene Summary

Adenine Count

978891 bp

Thymine Count

974886 bp

Guanine Count

725582 bp

Cytosine Count

727483 bp

Genome Length

3412171 bp

Protein-coding Genes

3056 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent protease atp-binding subunit clpxCAP35_05575Not AvailablePositive1257728 - 125897246326.2
hypothetical proteinCAP35_05580Not AvailablePositive1259006 - 125932011561.0
hypothetical proteinCAP35_05585Not AvailableNegative1259349 - 125973514799.8
hypothetical proteinCAP35_05590Not AvailableNegative1259735 - 126024119508.4
thymidylate synthaseCAP35_05595Not AvailableNegative1260289 - 126108330232.2
hypothetical proteinCAP35_05600Not AvailablePositive1261213 - 12614047622.64
hypothetical proteinCAP35_05605Not AvailablePositive1261487 - 126301959150.6
glycosyl transferaseCAP35_05610Not AvailablePositive1263095 - 126381427307.1
gamma carbonic anhydrase family proteinCAP35_05615Not AvailablePositive1263816 - 126432818084.9
hypothetical proteinCAP35_05620Not AvailablePositive1264449 - 126515625692.1

Displaying genes 1121 – 1130 of 3101 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.