Hydrogenophaga sp. IBVHS2

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Hydrogenophaga

Description

Hydrogenophaga sp. IBVHS2 is a Gram-negative bacterium characterized by its rod-shaped morphology. This organism possesses a single replicon, which is indicative of its genetic structure and replication process. The genomic information for Hydrogenophaga sp. IBVHS2 can be referenced under the accession number NFUT00000000.1. The classification of Hydrogenophaga sp. within the broader context of microbiology suggests its potential ecological roles, particularly in environments where hydrogen and other small molecules are prevalent. As a member of the Hydrogenophaga genus, this bacterium may be involved in biogeochemical cycles, particularly those involving hydrogen, contributing to the degradation of organic compounds and the cycling of nutrients. Understanding the traits of Hydrogenophaga sp. IBVHS2 can provide insights into its ecological functions and its potential applications in bioremediation or bioenergy production, given the genus's known capabilities in utilizing hydrogen as an energy source. The single replicon structure may also suggest simplified regulatory mechanisms for its metabolic processes, potentially enhancing its adaptability in various environmental niches.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusHydrogenophaga
SpeciesHydrogenophaga sp. IBVHS2
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hydrogenophaga sp. IBVHS2 contig000007, whole genome shotgun

Gene Summary

Adenine Count

493698 bp

Thymine Count

496109 bp

Guanine Count

1090671 bp

Cytosine Count

1084837 bp

Genome Length

3171179 bp

Protein-coding Genes

2952 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome c oxidase subunit 3CAP38_09605Not AvailableNegative2016409 - 201729033210.5
hypothetical proteinCAP38_09610Not AvailableNegative2017346 - 20175497320.26
cytochrome c oxidase assembly proteinCAP38_09615Not AvailableNegative2017546 - 201817522786.6
cytochrome c oxidase subunit iCAP38_09620Not AvailableNegative2018332 - 201995160028.5
cytochrome c oxidase subunit iiCAP38_09625Not AvailableNegative2019996 - 202109640124.6
hypothetical proteinCAP38_09630Not AvailableNegative2021304 - 202178617411.0
hypothetical proteinCAP38_09635Not AvailableNegative2021957 - 202283233202.9
hypothetical proteinCAP38_09640Not AvailablePositive2022963 - 202362523577.6
trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trmlCAP38_09645Not AvailablePositive2023636 - 202410917397.8
dehydrataseCAP38_09650Not AvailableNegative2024100 - 202455516450.8

Displaying genes 1911 – 1920 of 2995 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.