Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVAST0582 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1336614 bp
Thymine Count
1338784 bp
Guanine Count
1360007 bp
Cytosine Count
1378519 bp
Genome Length
5413924 bp
Protein-coding Genes
5292 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein fixa | B9M99_20710 | Not Available | Negative | 4094971 - 4095741 | 27187.3 |
| l-carnitine/gamma-butyrobetaine antiporter | B9M99_20715 | Not Available | Positive | 4096214 - 4097728 | 56590.4 |
| crotonobetainyl-coa dehydrogenase | B9M99_20720 | Not Available | Positive | 4097759 - 4098901 | 42560.8 |
| l-carnitine coa-transferase | B9M99_20725 | Not Available | Positive | 4099030 - 4100247 | 45071.2 |
| atp-dependent acyl-coa ligase | B9M99_20730 | Not Available | Positive | 4100321 - 4101874 | 58594.4 |
| carnitinyl-coa dehydratase | B9M99_20735 | Not Available | Positive | 4101983 - 4102768 | 28177.8 |
| phenylacetic acid degradation protein paay | B9M99_20740 | Not Available | Positive | 4102774 - 4103364 | 21206.7 |
| transcriptional activatory protein caif | B9M99_20745 | Not Available | Negative | 4103570 - 4103965 | 15437.1 |
| hypothetical protein | B9M99_20750 | Not Available | Positive | 4104000 - 4104218 | 8212.92 |
| carbamoyl phosphate synthase large subunit | B9M99_20755 | Not Available | Negative | 4104226 - 4107444 | 117822.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





