Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVAST0582 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1336614 bp
Thymine Count
1338784 bp
Guanine Count
1360007 bp
Cytosine Count
1378519 bp
Genome Length
5413924 bp
Protein-coding Genes
5292 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion protein | B9M99_20505 | Not Available | Positive | 4051584 - 4053443 | 71362.4 |
| type vi secretion protein | B9M99_20510 | Not Available | Positive | 4053407 - 4054456 | 39151.0 |
| type vi secretion system protein impi | B9M99_20515 | Not Available | Positive | 4054365 - 4055753 | 51066.6 |
| type vi secretion lipoprotein | B9M99_20520 | Not Available | Positive | 4055750 - 4056274 | 19267.9 |
| type vi secretion protein | B9M99_20525 | Not Available | Positive | 4056277 - 4057623 | 49863.2 |
| hypothetical protein | B9M99_20530 | Not Available | Positive | 4057628 - 4058401 | 29719.2 |
| clpv1 family t6ss atpase | B9M99_20535 | Not Available | Positive | 4058411 - 4061143 | 99569.8 |
| type vi secretion-associated protein | B9M99_20540 | Not Available | Positive | 4061140 - 4061883 | 26476.8 |
| type vi secretion-associated protein | B9M99_20545 | Not Available | Positive | 4061822 - 4063330 | 56207.9 |
| type vi secretion protein icmf | B9M99_20550 | Not Available | Positive | 4063350 - 4066877 | 134636.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





