Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVAST0582 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1336614 bp
Thymine Count
1338784 bp
Guanine Count
1360007 bp
Cytosine Count
1378519 bp
Genome Length
5413924 bp
Protein-coding Genes
5292 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B9M99_20455 | Not Available | Positive | 4040810 - 4040950 | 5050.05 |
| isas1 family transposase | B9M99_20460 | Not Available | Negative | 4040978 - 4041934 | 36391.5 |
| hypothetical protein | B9M99_20465 | Not Available | Negative | 4042247 - 4043257 | 37698.9 |
| hypothetical protein | B9M99_20470 | Not Available | Negative | 4043324 - 4044895 | 59158.6 |
| hypothetical protein | B9M99_20475 | Not Available | Negative | 4044917 - 4045759 | 32744.9 |
| type iv secretion protein rhs | B9M99_20480 | Not Available | Negative | 4045756 - 4047714 | 72843.0 |
| hcp1 family type vi secretion system effector | B9M99_20485 | Not Available | Negative | 4047935 - 4048453 | 19191.7 |
| type vi secretion protein | B9M99_20490 | Not Available | Positive | 4049156 - 4049659 | 18396.1 |
| type vi secretion protein | B9M99_20495 | Not Available | Positive | 4049682 - 4051166 | 55671.9 |
| type vi secretion protein | B9M99_20500 | Not Available | Positive | 4051171 - 4051596 | 16088.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





