Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVAST0582 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1336614 bp
Thymine Count
1338784 bp
Guanine Count
1360007 bp
Cytosine Count
1378519 bp
Genome Length
5413924 bp
Protein-coding Genes
5292 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (uridine(54)-c5)-methyltransferase trma | B9M99_14520 | Not Available | Negative | 2844497 - 2845597 | 41939.3 |
| tonb-dependent vitamin b12 receptor | B9M99_14525 | Not Available | Positive | 2845966 - 2847810 | 68424.7 |
| glutamate racemase | B9M99_14530 | Not Available | Positive | 2847755 - 2848612 | 31074.8 |
| crispr-associated helicase/endonuclease cas3 | B9M99_14535 | Not Available | Positive | 2849347 - 2852046 | 101706.0 |
| type i-e crispr-associated protein cse1/casa | B9M99_14540 | Not Available | Positive | 2852138 - 2853706 | 59456.9 |
| type i-e crispr-associated protein cse2/casb | B9M99_14545 | Not Available | Positive | 2853703 - 2854239 | 20687.6 |
| type i-e crispr-associated protein cas7/cse4/casc | B9M99_14550 | Not Available | Positive | 2854254 - 2855309 | 38404.6 |
| type i-e crispr-associated protein cas5/casd | B9M99_14555 | Not Available | Positive | 2855320 - 2856066 | 28647.1 |
| type i-e crispr-associated protein cas6/cse3/case | B9M99_14560 | Not Available | Positive | 2856048 - 2856698 | 24819.7 |
| type i-e crispr-associated endoribonuclease cas2 | B9M99_14570 | Not Available | Positive | 2857615 - 2857908 | 10976.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





