Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVAST0582 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1336614 bp
Thymine Count
1338784 bp
Guanine Count
1360007 bp
Cytosine Count
1378519 bp
Genome Length
5413924 bp
Protein-coding Genes
5292 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein ii | B9M99_13195 | Not Available | Negative | 2575356 - 2577020 | 59800.9 |
| homoprotocatechuate degradation operon regulator, hpar | B9M99_13200 | Not Available | Negative | 2577139 - 2577639 | 19526.7 |
| 4-hydroxyphenylacetate degradation protein | B9M99_13205 | Not Available | Positive | 2577851 - 2579146 | 47342.3 |
| 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | B9M99_13210 | Not Available | Positive | 2579143 - 2580609 | 53044.7 |
| 3,4-dihydroxyphenylacetate 2,3-dioxygenase | B9M99_13215 | Not Available | Positive | 2580611 - 2581462 | 32020.2 |
| 5-carboxymethyl-2-hydroxymuconate delta-isomerase | B9M99_13220 | Not Available | Positive | 2581472 - 2581852 | 14360.3 |
| 2-oxo-hepta-3-ene-1,7-dioic acid hydratase | B9M99_13225 | Not Available | Positive | 2581902 - 2582723 | 30372.3 |
| 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase | B9M99_13230 | Not Available | Positive | 2582716 - 2583522 | 28923.8 |
| 4-hydroxyphenylacetate permease | B9M99_13235 | Not Available | Positive | 2583637 - 2585073 | 52793.4 |
| 4-hydroxyphenylacetate catabolism regulatory protein hpaa | B9M99_13240 | Not Available | Positive | 2585083 - 2585973 | 34457.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





