Escherichia coli strain CVAST0582

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain CVAST0582 is a Gram-negative, rod-shaped bacterium that exhibits mobility and possesses flagella. It is classified as a facultative anaerobe, allowing it to thrive in both aerobic and anaerobic environments. The strain is mesophilic, with an optimal growth temperature of 37°C, which is typical for many pathogenic bacteria associated with warm-blooded hosts. This strain is primarily host-associated, demonstrating a diverse range of potential hosts, including Homo sapiens (humans), Gallus gallus (chickens), Bos taurus (cattle), and numerous other mammals, birds, and invertebrates. Its free-living biotic relationship indicates that it can survive independently in various environments, although it is often associated with its hosts. CVAST0582 is associated with a wide array of health effects, particularly in humans, where it is implicated in urinary tract infections (UTIs), gastrointestinal infections, and more severe conditions like neonatal meningitis and hemolytic uremic syndrome (HUS). The strain's pathogenicity is significant, given its ability to cause various infections, including peritonitis, diarrhea, and even complications leading to renal failure. The broad host range and the diversity of health impacts suggest that E. coli strain CVAST0582 plays a complex role in both human health and animal health, highlighting its potential as a significant pathogen in the environment and within host populations. This underscores the importance of monitoring and understanding such strains, especially in the context of foodborne illnesses and zoonotic diseases.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain CVAST0582

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain CVAST0582
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain CVAST0582 NODE_206_length_513_cov_150.56,

Gene Summary

Adenine Count

1336614 bp

Thymine Count

1338784 bp

Guanine Count

1360007 bp

Cytosine Count

1378519 bp

Genome Length

5413924 bp

Protein-coding Genes

5292 genes

Non-Coding Genes

300 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent helicaseB9M99_10715Not AvailableNegative2097900 - 209966066546.0
16s rrna pseudouridine(516) synthaseB9M99_10725Not AvailablePositive2099810 - 210050525866.8
bcr/cfla family multidrug efflux mfs transporterB9M99_10730Not AvailablePositive2100533 - 210172343341.4
hypothetical proteinB9M99_10735Not AvailablePositive2102056 - 210240012525.9
microcin c abc transporter atp-binding protein yejfB9M99_10740Not AvailableNegative2102404 - 210399358636.6
microcin abc transporter permeaseB9M99_10745Not AvailableNegative2103995 - 210502038133.7
abc transporter permeaseB9M99_10750Not AvailableNegative2105020 - 210611440362.6
abc transporter substrate-binding proteinB9M99_10755Not AvailableNegative2106115 - 210792969742.7
phage resistance proteinB9M99_10760Not AvailableNegative2108011 - 210956758545.4
bifunctional murein dd-endopeptidase/murein ld-carboxypeptidaseB9M99_10765Not AvailableNegative2109748 - 211031421041.1

Displaying genes 2341 – 2350 of 5592 in total

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total