Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain An16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588569 bp
Thymine Count
1538368 bp
Guanine Count
1082565 bp
Cytosine Count
1161857 bp
Genome Length
5371359 bp
Protein-coding Genes
4239 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| slc13 family permease | B5F00_04645 | Not Available | Negative | 1117544 - 1119406 | 67150.1 |
| haloacid dehalogenase | B5F00_04650 | Not Available | Positive | 1119595 - 1120002 | 14540.6 |
| isochorismate synthase | B5F00_04655 | Not Available | Positive | 1119999 - 1121168 | 44328.7 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | B5F00_04660 | Not Available | Positive | 1121168 - 1122841 | 62975.0 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | B5F00_04665 | Not Available | Positive | 1122841 - 1123662 | 30338.5 |
| hypothetical protein | B5F00_04670 | Not Available | Positive | 1123683 - 1124066 | 14976.9 |
| o-succinylbenzoate synthase | B5F00_04675 | Not Available | Positive | 1124045 - 1125100 | 39882.0 |
| o-succinylbenzoic acid--coa ligase | B5F00_04680 | Not Available | Positive | 1125097 - 1126182 | 40574.4 |
| arac family transcriptional regulator | B5F00_04685 | Not Available | Positive | 1126438 - 1127325 | 34472.4 |
| duf4250 domain-containing protein | B5F00_04690 | Not Available | Negative | 1127388 - 1127564 | 6921.42 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

