Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain An16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588569 bp
Thymine Count
1538368 bp
Guanine Count
1082565 bp
Cytosine Count
1161857 bp
Genome Length
5371359 bp
Protein-coding Genes
4239 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B5F00_04495 | Not Available | Negative | 1075761 - 1075979 | 8173.18 |
| rna polymerase subunit sigma-70 | B5F00_04500 | Not Available | Positive | 1076093 - 1076644 | 21561.7 |
| anti-sigma factor | B5F00_04505 | Not Available | Positive | 1076748 - 1077917 | 44606.6 |
| susc/raga family tonb-linked outer membrane protein | B5F00_04510 | Not Available | Positive | 1077933 - 1081322 | 126869.0 |
| ragb/susd family nutrient uptake outer membrane protein | B5F00_04515 | Not Available | Positive | 1081341 - 1082855 | 56840.2 |
| metallophosphatase | B5F00_04520 | Not Available | Positive | 1082903 - 1084066 | 44633.0 |
| l-serine ammonia-lyase | B5F00_04525 | Not Available | Positive | 1084216 - 1085424 | 43966.3 |
| hypothetical protein | B5F00_04530 | Not Available | Negative | 1085604 - 1086044 | 16624.2 |
| duf4738 domain-containing protein | B5F00_04535 | Not Available | Negative | 1086137 - 1086706 | 21153.6 |
| potassium transporter | B5F00_04540 | Not Available | Negative | 1086921 - 1087607 | 25637.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

