Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain An16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588569 bp
Thymine Count
1538368 bp
Guanine Count
1082565 bp
Cytosine Count
1161857 bp
Genome Length
5371359 bp
Protein-coding Genes
4239 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B5F00_04030 | Not Available | Negative | 986971 - 987345 | 14063.1 |
| peptidylprolyl isomerase | B5F00_04035 | Not Available | Positive | 987701 - 988267 | 20612.2 |
| putative dna modification/repair radical sam protein | B5F00_04040 | Not Available | Positive | 988695 - 989963 | 48577.8 |
| dna metabolism protein | B5F00_04045 | Not Available | Positive | 989960 - 990727 | 30575.8 |
| trna pseudouridine(38-40) synthase trua | B5F00_04050 | Not Available | Negative | 990693 - 991496 | 31005.9 |
| hypothetical protein | B5F00_04055 | Not Available | Negative | 991501 - 992175 | 24792.2 |
| phoh family protein | B5F00_04060 | Not Available | Positive | 992333 - 993337 | 37741.5 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | B5F00_04065 | Not Available | Positive | 993358 - 994302 | 35902.1 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | B5F00_04070 | Not Available | Positive | 994399 - 995136 | 27961.9 |
| shikimate dehydrogenase | B5F00_04075 | Not Available | Positive | 995155 - 995895 | 27737.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

