Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain An16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588569 bp
Thymine Count
1538368 bp
Guanine Count
1082565 bp
Cytosine Count
1161857 bp
Genome Length
5371359 bp
Protein-coding Genes
4239 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B5F00_03880 | Not Available | Positive | 949882 - 950259 | 14654.4 |
| hypothetical protein | B5F00_03885 | Not Available | Positive | 950271 - 950717 | 17677.6 |
| susc/raga family tonb-linked outer membrane protein | B5F00_03890 | Not Available | Positive | 950991 - 954152 | 117854.0 |
| ragb/susd family nutrient uptake outer membrane protein | B5F00_03895 | Not Available | Positive | 954176 - 955906 | 65720.7 |
| nucleoside triphosphate pyrophosphohydrolase | B5F00_03900 | Not Available | Negative | 956101 - 956886 | 30580.4 |
| valine--trna ligase | B5F00_03905 | Not Available | Positive | 956997 - 959624 | 99809.8 |
| hypothetical protein | B5F00_03910 | Not Available | Negative | 959805 - 960245 | 16084.2 |
| rna polymerase subunit sigma-70 | B5F00_03915 | Not Available | Positive | 960390 - 960665 | 10785.7 |
| rna polymerase subunit sigma-70 | B5F00_03920 | Not Available | Positive | 960671 - 960934 | 9832.95 |
| hypothetical protein | B5F00_03925 | Not Available | Positive | 960931 - 961299 | 14582.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

