Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain An16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588569 bp
Thymine Count
1538368 bp
Guanine Count
1082565 bp
Cytosine Count
1161857 bp
Genome Length
5371359 bp
Protein-coding Genes
4239 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent fis family transcriptional regulator | B5F00_03730 | Not Available | Negative | 916024 - 917286 | 46836.1 |
| inositol-3-phosphate synthase | B5F00_03735 | Not Available | Negative | 917455 - 918762 | 48858.8 |
| ribokinase | B5F00_03740 | Not Available | Positive | 918898 - 919794 | 33376.9 |
| mfs transporter | B5F00_03745 | Not Available | Negative | 919847 - 921046 | 44238.1 |
| haloacid dehalogenase | B5F00_03750 | Not Available | Negative | 921052 - 921774 | 27189.8 |
| tigr00374 family protein | B5F00_03755 | Not Available | Negative | 921779 - 922783 | 37650.4 |
| cdp-alcohol phosphatidyltransferase | B5F00_03760 | Not Available | Negative | 922780 - 923730 | 37217.4 |
| hypothetical protein | B5F00_03765 | Not Available | Negative | 923735 - 924589 | 31676.6 |
| nucleoside-diphosphate-sugar pyrophosphorylase | B5F00_03770 | Not Available | Negative | 924611 - 925321 | 26316.7 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | B5F00_03775 | Not Available | Negative | 925365 - 926465 | 40675.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

