Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain An16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588569 bp
Thymine Count
1538368 bp
Guanine Count
1082565 bp
Cytosine Count
1161857 bp
Genome Length
5371359 bp
Protein-coding Genes
4239 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gdp-mannose 4,6-dehydratase | B5F00_03430 | Not Available | Positive | 855766 - 856845 | 40921.0 |
| gdp-fucose synthetase | B5F00_03435 | Not Available | Positive | 856865 - 857947 | 41077.3 |
| mannose-1-phosphate guanylyltransferase | B5F00_03440 | Not Available | Positive | 857962 - 859005 | 39311.3 |
| hypothetical protein | B5F00_03445 | Not Available | Positive | 859009 - 859437 | 17011.3 |
| alpha-rhamnosidase | B5F00_03450 | Not Available | Negative | 859599 - 861743 | 82011.8 |
| pectate lyase | B5F00_03455 | Not Available | Negative | 861758 - 863581 | 68596.1 |
| atp-binding protein | B5F00_03460 | Not Available | Negative | 863606 - 865711 | 78790.9 |
| alpha-rhamnosidase | B5F00_03465 | Not Available | Negative | 865938 - 869912 | 149929.0 |
| glycoside hydrolase | B5F00_03470 | Not Available | Negative | 869918 - 871387 | 56411.5 |
| family 88 glycosyl hydrolase | B5F00_03475 | Not Available | Negative | 871584 - 872780 | 45341.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

