Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain An16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588569 bp
Thymine Count
1538368 bp
Guanine Count
1082565 bp
Cytosine Count
1161857 bp
Genome Length
5371359 bp
Protein-coding Genes
4239 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | B5F00_02820 | Not Available | Negative | 694224 - 695594 | 51896.3 |
| pectate lyase | B5F00_02825 | Not Available | Negative | 695611 - 697752 | 81700.3 |
| s9 family peptidase | B5F00_02830 | Not Available | Negative | 697993 - 700236 | 85847.0 |
| six-hairpin glycosidase | B5F00_02835 | Not Available | Negative | 700248 - 702653 | 89724.0 |
| glycoside hydrolase | B5F00_02840 | Not Available | Negative | 702780 - 705188 | 90208.2 |
| glycoside hydrolase | B5F00_02845 | Not Available | Negative | 705191 - 707914 | 103128.0 |
| duf4859 domain-containing protein | B5F00_02850 | Not Available | Negative | 708257 - 709255 | 36122.8 |
| ragb/susd family nutrient uptake outer membrane protein | B5F00_02855 | Not Available | Negative | 709284 - 710948 | 63212.5 |
| susc/raga family tonb-linked outer membrane protein | B5F00_02860 | Not Available | Negative | 710961 - 713996 | 112891.0 |
| hypothetical protein | B5F00_02865 | Not Available | Positive | 714184 - 714483 | 11755.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

