Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain An16 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1588569 bp
Thymine Count
1538368 bp
Guanine Count
1082565 bp
Cytosine Count
1161857 bp
Genome Length
5371359 bp
Protein-coding Genes
4239 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family protein | B5F00_02770 | Not Available | Negative | 681740 - 684778 | 111965.0 |
| duf4861 domain-containing protein | B5F00_02775 | Not Available | Negative | 684955 - 686127 | 43033.6 |
| gluconate 5-dehydrogenase | B5F00_02780 | Not Available | Negative | 686224 - 687027 | 28590.5 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | B5F00_02785 | Not Available | Negative | 687064 - 687906 | 31682.7 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | B5F00_02790 | Not Available | Negative | 688077 - 689477 | 52376.7 |
| dihydrolipoyl dehydrogenase | B5F00_02795 | Not Available | Negative | 689477 - 690817 | 47693.8 |
| hypothetical protein | B5F00_02800 | Not Available | Negative | 690833 - 691246 | 15656.5 |
| hypothetical protein | B5F00_02805 | Not Available | Negative | 691250 - 691660 | 15446.6 |
| dna-binding protein | B5F00_02810 | Not Available | Negative | 691736 - 692296 | 21549.0 |
| l-aspartate oxidase | B5F00_02815 | Not Available | Positive | 692452 - 694032 | 59025.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

